(1R,2R,4S)-4-((3-Amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,12-tetrahydroxy-6,11-dioxo-1-naphthacenecarboxylic acid

Details

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Internal ID fddb4188-6d5b-4730-946e-cae53e95acf3
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name (1R,2R,4S)-4-[(2R,4S,5S,6S)-4-amino-5-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-2,5,7,12-tetrahydroxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H29NO11/c1-3-27(37)8-13(39-14-7-11(28)21(30)9(2)38-14)16-17(20(27)26(35)36)25(34)18-19(24(16)33)23(32)15-10(22(18)31)5-4-6-12(15)29/h4-6,9,11,13-14,20-21,29-30,33-34,37H,3,7-8,28H2,1-2H3,(H,35,36)/t9-,11-,13-,14-,20-,21+,27+/m0/s1
InChI Key MMYTYGXIKKVLES-AGMCFEMXSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C27H29NO11
Molecular Weight 543.50 g/mol
Exact Mass 543.17406074 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 0.20
Atomic LogP (AlogP) 1.17
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 4

Synonyms

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97583-07-8
D788-1
D 788-1
C12427
D-788-1
(1R,2R,4S)-4-[(2R,4S,5S,6S)-4-amino-5-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-2,5,7,12-tetrahydroxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylic acid
AC1L2QWI
AC1Q6JIH
10-Carboxy-13-deoxocarminomycin
CHEBI:31047
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (1R,2R,4S)-4-((3-Amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,12-tetrahydroxy-6,11-dioxo-1-naphthacenecarboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6654 66.54%
Caco-2 - 0.8306 83.06%
Blood Brain Barrier - 0.9750 97.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Nucleus 0.6222 62.22%
OATP2B1 inhibitior - 0.7317 73.17%
OATP1B1 inhibitior + 0.9045 90.45%
OATP1B3 inhibitior + 0.9454 94.54%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior + 0.7278 72.78%
P-glycoprotein inhibitior - 0.6357 63.57%
P-glycoprotein substrate + 0.8217 82.17%
CYP3A4 substrate + 0.6596 65.96%
CYP2C9 substrate - 0.8443 84.43%
CYP2D6 substrate - 0.8535 85.35%
CYP3A4 inhibition - 0.9107 91.07%
CYP2C9 inhibition - 0.9247 92.47%
CYP2C19 inhibition - 0.9027 90.27%
CYP2D6 inhibition - 0.9125 91.25%
CYP1A2 inhibition + 0.7013 70.13%
CYP2C8 inhibition - 0.7332 73.32%
CYP inhibitory promiscuity - 0.8634 86.34%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6055 60.55%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9369 93.69%
Skin irritation - 0.7961 79.61%
Skin corrosion - 0.9297 92.97%
Ames mutagenesis + 0.9600 96.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5906 59.06%
Micronuclear + 0.7400 74.00%
Hepatotoxicity - 0.6198 61.98%
skin sensitisation - 0.8670 86.70%
Respiratory toxicity + 0.9556 95.56%
Reproductive toxicity + 0.9889 98.89%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.8066 80.66%
Acute Oral Toxicity (c) I 0.5318 53.18%
Estrogen receptor binding + 0.8691 86.91%
Androgen receptor binding + 0.7555 75.55%
Thyroid receptor binding - 0.4923 49.23%
Glucocorticoid receptor binding + 0.8600 86.00%
Aromatase binding + 0.7997 79.97%
PPAR gamma + 0.8384 83.84%
Honey bee toxicity - 0.8101 81.01%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9194 91.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.07% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.13% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.99% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.46% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.33% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.98% 95.56%
CHEMBL226 P30542 Adenosine A1 receptor 94.28% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.04% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.97% 99.23%
CHEMBL221 P23219 Cyclooxygenase-1 92.12% 90.17%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 92.04% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.69% 95.89%
CHEMBL4208 P20618 Proteasome component C5 85.55% 90.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.07% 96.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.87% 94.00%
CHEMBL3492 P49721 Proteasome Macropain subunit 83.28% 90.24%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 81.94% 99.15%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.36% 95.50%
CHEMBL340 P08684 Cytochrome P450 3A4 81.14% 91.19%
CHEMBL2996 Q05655 Protein kinase C delta 80.19% 97.79%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 126779
LOTUS LTS0139664
wikiData Q27114098