1-Palmitoyl-2-(5-hydroxy-8-oxo-6-octenedioyl)-sn-glycero-3-phosphatidylcholine

Details

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Internal ID f7f8ccc3-a211-4ce6-a0c3-88e78d37ba49
Taxonomy Lipids and lipid-like molecules > Glycerophospholipids > Glycerophosphocholines > Phosphatidylcholines
IUPAC Name [2-[(E)-7-carboxy-5-hydroxyhept-6-enoyl]oxy-3-hexadecanoyloxypropyl] 2-(trimethylazaniumyl)ethyl phosphate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C32H60NO11P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-20-31(37)41-26-29(27-43-45(39,40)42-25-24-33(2,3)4)44-32(38)21-18-19-28(34)22-23-30(35)36/h22-23,28-29,34H,5-21,24-27H2,1-4H3,(H-,35,36,39,40)/b23-22+
InChI Key URBBRAZIPCKXJD-GHVJWSGMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C32H60NO11P
Molecular Weight 665.80 g/mol
Exact Mass 665.39039873 g/mol
Topological Polar Surface Area (TPSA) 169.00 Ų
XlogP 5.90
Atomic LogP (AlogP) 5.30
H-Bond Acceptor 10
H-Bond Donor 2
Rotatable Bonds 30

Synonyms

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CHEBI:34119
Q27115824
1-Palmitoyl-2-(5-hydroxy-8-oxo-6-octenedioyl)-sn-glycero-3-phosphocholine
[2-[(E)-7-carboxy-5-hydroxyhept-6-enoyl]oxy-3-hexadecanoyloxypropyl] 2-(trimethylazaniumyl)ethyl phosphate

2D Structure

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2D Structure of 1-Palmitoyl-2-(5-hydroxy-8-oxo-6-octenedioyl)-sn-glycero-3-phosphatidylcholine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9239 92.39%
Caco-2 - 0.8374 83.74%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Plasma membrane 0.4584 45.84%
OATP2B1 inhibitior - 0.5709 57.09%
OATP1B1 inhibitior + 0.8850 88.50%
OATP1B3 inhibitior + 0.9356 93.56%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9363 93.63%
P-glycoprotein inhibitior + 0.6934 69.34%
P-glycoprotein substrate + 0.5741 57.41%
CYP3A4 substrate + 0.6400 64.00%
CYP2C9 substrate - 0.8034 80.34%
CYP2D6 substrate - 0.8639 86.39%
CYP3A4 inhibition - 0.6526 65.26%
CYP2C9 inhibition - 0.8447 84.47%
CYP2C19 inhibition - 0.7363 73.63%
CYP2D6 inhibition - 0.8971 89.71%
CYP1A2 inhibition - 0.8576 85.76%
CYP2C8 inhibition + 0.5460 54.60%
CYP inhibitory promiscuity - 0.9800 98.00%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.6800 68.00%
Carcinogenicity (trinary) Non-required 0.5541 55.41%
Eye corrosion - 0.9328 93.28%
Eye irritation - 0.8900 89.00%
Skin irritation - 0.7891 78.91%
Skin corrosion - 0.9256 92.56%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5994 59.94%
Micronuclear - 0.5700 57.00%
Hepatotoxicity - 0.8051 80.51%
skin sensitisation - 0.7946 79.46%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity - 0.7222 72.22%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity + 0.4573 45.73%
Acute Oral Toxicity (c) III 0.4950 49.50%
Estrogen receptor binding + 0.8254 82.54%
Androgen receptor binding - 0.8069 80.69%
Thyroid receptor binding - 0.5422 54.22%
Glucocorticoid receptor binding - 0.4704 47.04%
Aromatase binding + 0.5261 52.61%
PPAR gamma + 0.5596 55.96%
Honey bee toxicity - 0.7709 77.09%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.6324 63.24%
Fish aquatic toxicity + 0.8232 82.32%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3060 Q9Y345 Glycine transporter 2 98.42% 99.17%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.01% 97.29%
CHEMBL321 P14780 Matrix metalloproteinase 9 96.45% 92.12%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.30% 96.09%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 94.61% 92.86%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 92.31% 92.08%
CHEMBL2581 P07339 Cathepsin D 91.99% 98.95%
CHEMBL5255 O00206 Toll-like receptor 4 90.43% 92.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.37% 93.56%
CHEMBL4227 P25090 Lipoxin A4 receptor 88.87% 100.00%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 88.44% 91.81%
CHEMBL202 P00374 Dihydrofolate reductase 87.76% 89.92%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 87.46% 100.00%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 85.99% 85.94%
CHEMBL230 P35354 Cyclooxygenase-2 85.91% 89.63%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.01% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 84.60% 91.19%
CHEMBL299 P17252 Protein kinase C alpha 84.20% 98.03%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 83.63% 96.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.59% 96.90%
CHEMBL3401 O75469 Pregnane X receptor 82.59% 94.73%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 82.47% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.90% 94.33%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 80.80% 95.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 5282301
LOTUS LTS0066468
wikiData Q27115824