1-O-methyl-6-O-(alpha-D-ribofuranosyl)emodin

Details

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Internal ID e68025b6-4c43-4fa8-bcf0-30651743421f
Taxonomy Benzenoids > Anthracenes > Anthraquinones
IUPAC Name 3-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-1-hydroxy-8-methoxy-6-methylanthracene-9,10-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H20O9/c1-8-3-10-16(13(4-8)28-2)19(26)15-11(17(10)24)5-9(6-12(15)23)29-21-20(27)18(25)14(7-22)30-21/h3-6,14,18,20-23,25,27H,7H2,1-2H3/t14-,18-,20-,21+/m1/s1
InChI Key YSOKOLXNOPRZHN-STCFGPAYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H20O9
Molecular Weight 416.40 g/mol
Exact Mass 416.11073221 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 0.30
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 1-O-methyl-6-O-(alpha-D-ribofuranosyl)emodin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7372 73.72%
Caco-2 - 0.8018 80.18%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.5948 59.48%
OATP2B1 inhibitior - 0.5714 57.14%
OATP1B1 inhibitior + 0.9090 90.90%
OATP1B3 inhibitior + 0.9493 94.93%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.7361 73.61%
P-glycoprotein inhibitior - 0.7129 71.29%
P-glycoprotein substrate - 0.8756 87.56%
CYP3A4 substrate + 0.5956 59.56%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8495 84.95%
CYP3A4 inhibition - 0.7966 79.66%
CYP2C9 inhibition - 0.6834 68.34%
CYP2C19 inhibition - 0.8148 81.48%
CYP2D6 inhibition - 0.9331 93.31%
CYP1A2 inhibition - 0.7038 70.38%
CYP2C8 inhibition - 0.5981 59.81%
CYP inhibitory promiscuity - 0.6523 65.23%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9643 96.43%
Carcinogenicity (trinary) Non-required 0.6553 65.53%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.8532 85.32%
Skin irritation - 0.8374 83.74%
Skin corrosion - 0.9534 95.34%
Ames mutagenesis + 0.7336 73.36%
Human Ether-a-go-go-Related Gene inhibition - 0.6416 64.16%
Micronuclear + 0.6433 64.33%
Hepatotoxicity - 0.6698 66.98%
skin sensitisation - 0.8564 85.64%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity + 0.7574 75.74%
Acute Oral Toxicity (c) III 0.6139 61.39%
Estrogen receptor binding + 0.7665 76.65%
Androgen receptor binding - 0.5930 59.30%
Thyroid receptor binding - 0.5465 54.65%
Glucocorticoid receptor binding + 0.6126 61.26%
Aromatase binding + 0.6110 61.10%
PPAR gamma + 0.6188 61.88%
Honey bee toxicity - 0.7825 78.25%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9185 91.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.38% 91.11%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 96.25% 96.21%
CHEMBL2581 P07339 Cathepsin D 95.97% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.89% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.91% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.09% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.78% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 89.63% 94.73%
CHEMBL4208 P20618 Proteasome component C5 89.38% 90.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.29% 99.23%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.56% 99.15%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.79% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.61% 99.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.12% 85.14%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.57% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.28% 86.92%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.47% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.86% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.65% 95.89%
CHEMBL1951 P21397 Monoamine oxidase A 80.80% 91.49%
CHEMBL1966 Q02127 Dihydroorotate dehydrogenase 80.65% 96.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589439
LOTUS LTS0051121
wikiData Q105360364