1-O-Hexadecyl-sn-glycero-3-phosphocholine

Details

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Internal ID 82ef3cba-da58-4538-aebd-e87119594118
Taxonomy Lipids and lipid-like molecules > Glycerophospholipids > Glycerophosphocholines > Monoalkylglycerophosphocholines
IUPAC Name [(2R)-3-hexadecoxy-2-hydroxypropyl] 2-(trimethylazaniumyl)ethyl phosphate
SMILES (Canonical) CCCCCCCCCCCCCCCCOCC(COP(=O)([O-])OCC[N+](C)(C)C)O
SMILES (Isomeric) CCCCCCCCCCCCCCCCOC[C@H](COP(=O)([O-])OCC[N+](C)(C)C)O
InChI InChI=1S/C24H52NO6P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-20-29-22-24(26)23-31-32(27,28)30-21-19-25(2,3)4/h24,26H,5-23H2,1-4H3/t24-/m1/s1
InChI Key VLBPIWYTPAXCFJ-XMMPIXPASA-N
Popularity 29 references in papers

Physical and Chemical Properties

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Molecular Formula C24H52NO6P
Molecular Weight 481.60 g/mol
Exact Mass 481.35322538 g/mol
Topological Polar Surface Area (TPSA) 88.10 Ų
XlogP 5.90
Atomic LogP (AlogP) 5.05
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 24

Synonyms

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1-O-Hexadecyl-sn-glycero-3-phosphocholine
Lyso-gepc
1-O-Hexadecyl-2-lyso-glycero-3-phosphorylcholine
DTXSID70967131
[(2R)-3-hexadecoxy-2-hydroxypropyl] 2-(trimethylazaniumyl)ethyl phosphate
((2R)-3-hexadecoxy-2-hydroxypropyl) 2-(trimethylazaniumyl)ethyl phosphate
RefChem:907758
DTXCID501394736
Lyso-PAF C-16
1-hexadecyl-sn-glycero-3-phosphocholine
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1-O-Hexadecyl-sn-glycero-3-phosphocholine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9057 90.57%
Caco-2 - 0.7391 73.91%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Plasma membrane 0.4205 42.05%
OATP2B1 inhibitior - 0.8550 85.50%
OATP1B1 inhibitior + 0.9497 94.97%
OATP1B3 inhibitior + 0.9407 94.07%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.6042 60.42%
P-glycoprotein inhibitior - 0.5489 54.89%
P-glycoprotein substrate - 0.7282 72.82%
CYP3A4 substrate + 0.5655 56.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7674 76.74%
CYP3A4 inhibition - 0.8203 82.03%
CYP2C9 inhibition - 0.8802 88.02%
CYP2C19 inhibition - 0.8413 84.13%
CYP2D6 inhibition - 0.9104 91.04%
CYP1A2 inhibition - 0.9090 90.90%
CYP2C8 inhibition - 0.7508 75.08%
CYP inhibitory promiscuity - 0.9739 97.39%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.6600 66.00%
Carcinogenicity (trinary) Non-required 0.6332 63.32%
Eye corrosion - 0.8851 88.51%
Eye irritation - 0.7317 73.17%
Skin irritation - 0.7473 74.73%
Skin corrosion - 0.8999 89.99%
Ames mutagenesis - 0.8007 80.07%
Human Ether-a-go-go-Related Gene inhibition - 0.6891 68.91%
Micronuclear - 0.5600 56.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.7840 78.40%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity - 0.7556 75.56%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.5946 59.46%
Acute Oral Toxicity (c) III 0.4536 45.36%
Estrogen receptor binding + 0.7188 71.88%
Androgen receptor binding + 0.5698 56.98%
Thyroid receptor binding - 0.4876 48.76%
Glucocorticoid receptor binding - 0.6229 62.29%
Aromatase binding + 0.5827 58.27%
PPAR gamma + 0.5616 56.16%
Honey bee toxicity - 0.8908 89.08%
Biodegradation - 0.5750 57.50%
Crustacea aquatic toxicity + 0.5554 55.54%
Fish aquatic toxicity - 0.7264 72.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 99.16% 97.29%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 96.93% 92.86%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.71% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.75% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.71% 99.17%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 90.14% 85.94%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 89.16% 100.00%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 88.17% 80.33%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 87.72% 92.08%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 87.42% 90.24%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.96% 93.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.10% 97.25%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 84.44% 91.81%
CHEMBL4588 P22894 Matrix metalloproteinase 8 84.12% 94.66%
CHEMBL3401 O75469 Pregnane X receptor 83.04% 94.73%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.92% 93.03%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.59% 96.95%
CHEMBL1907 P15144 Aminopeptidase N 82.02% 93.31%
CHEMBL321 P14780 Matrix metalloproteinase 9 81.24% 92.12%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.24% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 162126
LOTUS LTS0099550
wikiData Q27133319