Harman-3-Carboxylic Acid

Details

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Internal ID 6c15271a-8eb3-4272-9765-0dfc7f946e9f
Taxonomy Alkaloids and derivatives > Harmala alkaloids
IUPAC Name 1-methyl-9H-pyrido[3,4-b]indole-3-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C13H10N2O2/c1-7-12-9(6-11(14-7)13(16)17)8-4-2-3-5-10(8)15-12/h2-6,15H,1H3,(H,16,17)
InChI Key MFEZJNMQTQMDRQ-UHFFFAOYSA-N
Popularity 21 references in papers

Physical and Chemical Properties

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Molecular Formula C13H10N2O2
Molecular Weight 226.23 g/mol
Exact Mass 226.074227566 g/mol
Topological Polar Surface Area (TPSA) 66.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.72
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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harman-3-carboxylic acid
1-Methyl-9H-Pyrido(3,4-b)indole-3-carboxylic acid
RefChem:1086367
22329-38-0
1-Methyl-9H-beta-carboline-3-carboxylic acid
MFCD00436515
1-Methyl-beta-carboline-3-carboxylic acid
9H-Pyrido[3,4-b]indole-3-carboxylicacid, 1-methyl-
1-methylbeta-carboline-3-carboxylic acid
9H-Pyrido[3,4-b]indole-3-carboxylic acid, 1-methyl-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Harman-3-Carboxylic Acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9969 99.69%
Caco-2 - 0.8646 86.46%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.6785 67.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9203 92.03%
OATP1B3 inhibitior + 0.9526 95.26%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.5308 53.08%
P-glycoprotein inhibitior - 0.9344 93.44%
P-glycoprotein substrate - 0.8942 89.42%
CYP3A4 substrate - 0.5740 57.40%
CYP2C9 substrate - 0.8058 80.58%
CYP2D6 substrate - 0.9010 90.10%
CYP3A4 inhibition - 0.6728 67.28%
CYP2C9 inhibition - 0.9429 94.29%
CYP2C19 inhibition - 0.8136 81.36%
CYP2D6 inhibition - 0.9234 92.34%
CYP1A2 inhibition + 0.5054 50.54%
CYP2C8 inhibition + 0.5553 55.53%
CYP inhibitory promiscuity - 0.8292 82.92%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9430 94.30%
Carcinogenicity (trinary) Non-required 0.7501 75.01%
Eye corrosion - 0.9931 99.31%
Eye irritation + 0.5772 57.72%
Skin irritation - 0.6724 67.24%
Skin corrosion - 0.9620 96.20%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8416 84.16%
Micronuclear + 0.8000 80.00%
Hepatotoxicity + 0.7199 71.99%
skin sensitisation - 0.9413 94.13%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.7000 70.00%
Nephrotoxicity - 0.8020 80.20%
Acute Oral Toxicity (c) III 0.4623 46.23%
Estrogen receptor binding + 0.7579 75.79%
Androgen receptor binding + 0.6709 67.09%
Thyroid receptor binding - 0.5891 58.91%
Glucocorticoid receptor binding + 0.7327 73.27%
Aromatase binding + 0.7148 71.48%
PPAR gamma + 0.6280 62.80%
Honey bee toxicity - 0.9808 98.08%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity - 0.5990 59.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.85% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.30% 99.23%
CHEMBL1781 P11387 DNA topoisomerase I 87.78% 97.00%
CHEMBL2581 P07339 Cathepsin D 87.40% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.41% 96.09%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 85.83% 94.62%
CHEMBL3401 O75469 Pregnane X receptor 85.23% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.92% 86.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.58% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 83.26% 91.49%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 80.53% 89.44%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.03% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Chimarrhis turbinata

Cross-Links

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PubChem 5406157
LOTUS LTS0047153
wikiData Q83047198