1-deoxy-D-xylulose 5-phosphate

Details

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Internal ID ab758114-7994-430e-9330-67ec4a316858
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Monosaccharides > Pentoses > Pentose phosphates
IUPAC Name [(2R,3S)-2,3-dihydroxy-4-oxopentyl] dihydrogen phosphate
SMILES (Canonical) CC(=O)C(C(COP(=O)(O)O)O)O
SMILES (Isomeric) CC(=O)[C@H]([C@@H](COP(=O)(O)O)O)O
InChI InChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)/t4-,5-/m1/s1
InChI Key AJPADPZSRRUGHI-RFZPGFLSSA-N
Popularity 365 references in papers

Physical and Chemical Properties

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Molecular Formula C5H11O7P
Molecular Weight 214.11 g/mol
Exact Mass 214.02423968 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP -3.10
Atomic LogP (AlogP) -1.59
H-Bond Acceptor 5
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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190079-18-6
DOXP
1-DEOXY-D-XYLULOSE-5-PHOSPHATE
deoxyxylulose phosphate
(2,3-DIHYDROXY-4-OXO-PENTOXY)PHOSPHONIC ACID
I4C288B3TN
[(2R,3S)-2,3-dihydroxy-4-oxopentyl] dihydrogen phosphate
CHEBI:16493
D-1-deoxyxylulose-5-P
deoxyxylulose-5-phosphate
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1-deoxy-D-xylulose 5-phosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7461 74.61%
Caco-2 - 0.9628 96.28%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.8652 86.52%
OATP2B1 inhibitior - 0.8513 85.13%
OATP1B1 inhibitior + 0.9595 95.95%
OATP1B3 inhibitior + 0.9453 94.53%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9604 96.04%
P-glycoprotein inhibitior - 0.9704 97.04%
P-glycoprotein substrate - 0.9403 94.03%
CYP3A4 substrate - 0.5808 58.08%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8093 80.93%
CYP3A4 inhibition - 0.9458 94.58%
CYP2C9 inhibition - 0.9163 91.63%
CYP2C19 inhibition - 0.9060 90.60%
CYP2D6 inhibition - 0.9270 92.70%
CYP1A2 inhibition - 0.9176 91.76%
CYP2C8 inhibition - 0.9864 98.64%
CYP inhibitory promiscuity - 0.9828 98.28%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.7100 71.00%
Carcinogenicity (trinary) Non-required 0.6258 62.58%
Eye corrosion + 0.5911 59.11%
Eye irritation - 0.9699 96.99%
Skin irritation - 0.7144 71.44%
Skin corrosion + 0.6368 63.68%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7679 76.79%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.5014 50.14%
skin sensitisation - 0.8438 84.38%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity - 0.8000 80.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.6916 69.16%
Acute Oral Toxicity (c) III 0.5880 58.80%
Estrogen receptor binding - 0.6534 65.34%
Androgen receptor binding - 0.7169 71.69%
Thyroid receptor binding - 0.6100 61.00%
Glucocorticoid receptor binding - 0.5790 57.90%
Aromatase binding - 0.7704 77.04%
PPAR gamma - 0.6708 67.08%
Honey bee toxicity - 0.6443 64.43%
Biodegradation + 0.6000 60.00%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity - 0.6213 62.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.21% 96.09%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 95.97% 97.29%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.94% 85.14%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 84.93% 94.01%
CHEMBL2581 P07339 Cathepsin D 84.36% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.39% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 82.33% 94.73%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.89% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.43% 94.33%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 81.43% 98.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana

Cross-Links

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PubChem 443201
LOTUS LTS0265924
wikiData Q2708025