Bredinin

Details

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Internal ID 9d4d160e-29c1-44f8-98d3-5133a3178a59
Taxonomy Nucleosides, nucleotides, and analogues > Imidazole ribonucleosides and ribonucleotides > 1-ribosyl-imidazolecarboxamides
IUPAC Name 1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-hydroxyimidazole-4-carboxamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C9H13N3O6/c10-7(16)4-8(17)12(2-11-4)9-6(15)5(14)3(1-13)18-9/h2-3,5-6,9,13-15,17H,1H2,(H2,10,16)
InChI Key HZQDCMWJEBCWBR-UHFFFAOYSA-N
Popularity 661 references in papers

Physical and Chemical Properties

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Molecular Formula C9H13N3O6
Molecular Weight 259.22 g/mol
Exact Mass 259.08043514 g/mol
Topological Polar Surface Area (TPSA) 151.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -2.70
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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NSC 289637;HE 69
5-hydroxy-1-pentofuranosyl-1h-imidazole-4-carboxamide
SCHEMBL7119
1H-Imidazole-4-carboxamide, 5-hydroxy-1-.beta.-D-ribofuranosyl-
CHEMBL165000
DTXSID30860619
HMS3372M17
HMS3869H13
AKOS015895934
1-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-hydroxyimidazole-4-carboxamide
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Bredinin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6584 65.84%
Caco-2 - 0.9499 94.99%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Nucleus 0.5851 58.51%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9414 94.14%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.9719 97.19%
P-glycoprotein inhibitior - 0.9412 94.12%
P-glycoprotein substrate - 0.9245 92.45%
CYP3A4 substrate - 0.5908 59.08%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8804 88.04%
CYP3A4 inhibition - 0.9325 93.25%
CYP2C9 inhibition - 0.9449 94.49%
CYP2C19 inhibition - 0.9318 93.18%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9073 90.73%
CYP2C8 inhibition - 0.9236 92.36%
CYP inhibitory promiscuity - 0.9584 95.84%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.4883 48.83%
Eye corrosion - 0.9890 98.90%
Eye irritation - 0.9198 91.98%
Skin irritation - 0.7613 76.13%
Skin corrosion - 0.9372 93.72%
Ames mutagenesis - 0.7770 77.70%
Human Ether-a-go-go-Related Gene inhibition - 0.7262 72.62%
Micronuclear + 0.9900 99.00%
Hepatotoxicity + 0.8730 87.30%
skin sensitisation - 0.8389 83.89%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.8130 81.30%
Acute Oral Toxicity (c) III 0.8032 80.32%
Estrogen receptor binding - 0.8682 86.82%
Androgen receptor binding - 0.8513 85.13%
Thyroid receptor binding - 0.5173 51.73%
Glucocorticoid receptor binding - 0.8641 86.41%
Aromatase binding + 0.6939 69.39%
PPAR gamma + 0.8199 81.99%
Honey bee toxicity - 0.9214 92.14%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.8000 80.00%
Fish aquatic toxicity - 0.9172 91.72%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293237 P54132 Bloom syndrome protein 2.8 nM
Potency
via Super-PRED
CHEMBL5514 P42858 Huntingtin 562.3 nM
Potency
via Super-PRED
CHEMBL1293232 Q16637 Survival motor neuron protein 35.5 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.88% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.26% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.21% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 84.91% 94.73%
CHEMBL3589 P55263 Adenosine kinase 83.19% 98.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.15% 89.00%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 81.78% 93.65%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.51% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.96% 97.25%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.37% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 4213
LOTUS LTS0128902
wikiData Q105035788