1-(1Z-hexadecenyl)-sn-glycero-3-phosphocholine

Details

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Internal ID 2ef5b54d-dac6-4941-a1f2-ca00f2612bbd
Taxonomy Lipids and lipid-like molecules > Glycerophospholipids > Glycerophosphocholines > 1Z-alkenylglycerophosphocholines > 1-(1Z-alkenyl)-glycero-3-phosphocholines
IUPAC Name [(2R)-3-[(Z)-hexadec-1-enoxy]-2-hydroxypropyl] 2-(trimethylazaniumyl)ethyl phosphate
SMILES (Canonical) CCCCCCCCCCCCCCC=COCC(COP(=O)([O-])OCC[N+](C)(C)C)O
SMILES (Isomeric) CCCCCCCCCCCCCC/C=C\OC[C@H](COP(=O)([O-])OCC[N+](C)(C)C)O
InChI InChI=1S/C24H50NO6P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-20-29-22-24(26)23-31-32(27,28)30-21-19-25(2,3)4/h18,20,24,26H,5-17,19,21-23H2,1-4H3/b20-18-/t24-/m1/s1
InChI Key HTZINLFNXLXRBC-CQLBIITFSA-N
Popularity 44 references in papers

Physical and Chemical Properties

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Molecular Formula C24H50NO6P
Molecular Weight 479.60 g/mol
Exact Mass 479.33757531 g/mol
Topological Polar Surface Area (TPSA) 88.10 Ų
XlogP 6.10
Atomic LogP (AlogP) 5.18
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 23

Synonyms

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Lysoplasmenylcholine
LPlasCho
PC(P-16:0/0:0)
LysoPC(P-16:0/0:0)
1-(1-enyl-palmitoyl)-glycero-3-phosphocholine
C16(Plasm) LPC
1-(1-enyl-palmitoyl)-GPC
SCHEMBL5428006
LysoPC P-16:0/0:0
CHEBI:73850
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1-(1Z-hexadecenyl)-sn-glycero-3-phosphocholine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8391 83.91%
Caco-2 - 0.7398 73.98%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Plasma membrane 0.6242 62.42%
OATP2B1 inhibitior - 0.8551 85.51%
OATP1B1 inhibitior + 0.9098 90.98%
OATP1B3 inhibitior + 0.9430 94.30%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.6996 69.96%
P-glycoprotein inhibitior - 0.4754 47.54%
P-glycoprotein substrate - 0.6176 61.76%
CYP3A4 substrate + 0.5729 57.29%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7849 78.49%
CYP3A4 inhibition - 0.8276 82.76%
CYP2C9 inhibition - 0.8823 88.23%
CYP2C19 inhibition - 0.8558 85.58%
CYP2D6 inhibition - 0.9032 90.32%
CYP1A2 inhibition - 0.8855 88.55%
CYP2C8 inhibition - 0.6603 66.03%
CYP inhibitory promiscuity - 0.9740 97.40%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.6200 62.00%
Carcinogenicity (trinary) Non-required 0.6118 61.18%
Eye corrosion - 0.8920 89.20%
Eye irritation - 0.8083 80.83%
Skin irritation - 0.7400 74.00%
Skin corrosion - 0.8857 88.57%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4793 47.93%
Micronuclear - 0.5500 55.00%
Hepatotoxicity - 0.8750 87.50%
skin sensitisation - 0.7955 79.55%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity - 0.7333 73.33%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.7038 70.38%
Acute Oral Toxicity (c) III 0.4854 48.54%
Estrogen receptor binding + 0.6712 67.12%
Androgen receptor binding + 0.5647 56.47%
Thyroid receptor binding - 0.5348 53.48%
Glucocorticoid receptor binding - 0.6493 64.93%
Aromatase binding - 0.4941 49.41%
PPAR gamma + 0.5202 52.02%
Honey bee toxicity - 0.8490 84.90%
Biodegradation - 0.5500 55.00%
Crustacea aquatic toxicity + 0.6415 64.15%
Fish aquatic toxicity - 0.6005 60.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.98% 97.29%
CHEMBL2581 P07339 Cathepsin D 96.44% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.42% 99.17%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.03% 96.09%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.73% 92.86%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 91.87% 92.08%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 89.84% 85.94%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 89.22% 96.95%
CHEMBL3401 O75469 Pregnane X receptor 88.08% 94.73%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.02% 100.00%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 87.42% 91.81%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 87.24% 80.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.44% 93.56%
CHEMBL4588 P22894 Matrix metalloproteinase 8 86.22% 94.66%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.27% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.16% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.99% 96.00%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 80.29% 90.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10917802
LOTUS LTS0139710
wikiData Q27144178