(2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-9-hydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-8-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid

Details

Top
Internal ID c06ac8f8-202d-4561-8ba7-706b116c9f54
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-9-hydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-8-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid
SMILES (Canonical) CC=C(C)C(=O)OC1CC2(C(=CCC3C2(CCC4C3(CCC(C4(C)C)OC5C(C(C(C(O5)C(=O)O)O)OC6C(C(C(C(O6)CO)O)O)O)O)C)C)C7C1(C(CC(C7)(C)C)O)CO)C
SMILES (Isomeric) C/C=C(\C)/C(=O)O[C@H]1C[C@@]2(C(=CC[C@H]3[C@]2(CC[C@@H]4[C@@]3(CC[C@@H](C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)C(=O)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)C)C)[C@H]7[C@@]1([C@H](CC(C7)(C)C)O)CO)C
InChI InChI=1S/C47H74O16/c1-10-22(2)39(58)60-30-19-46(9)23(24-17-42(3,4)18-28(50)47(24,30)21-49)11-12-27-44(7)15-14-29(43(5,6)26(44)13-16-45(27,46)8)61-41-35(55)36(34(54)37(63-41)38(56)57)62-40-33(53)32(52)31(51)25(20-48)59-40/h10-11,24-37,40-41,48-55H,12-21H2,1-9H3,(H,56,57)/b22-10+/t24-,25+,26-,27+,28-,29-,30-,31+,32-,33+,34-,35+,36-,37-,40-,41+,44-,45+,46+,47+/m0/s1
InChI Key IQRHXBGJUCOWOQ-GUFKJUHQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C47H74O16
Molecular Weight 895.10 g/mol
Exact Mass 894.49768627 g/mol
Topological Polar Surface Area (TPSA) 262.00 Ų
XlogP 4.60
Atomic LogP (AlogP) 2.34
H-Bond Acceptor 15
H-Bond Donor 9
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-9-hydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-8-[(E)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8821 88.21%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7530 75.30%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.8579 85.79%
P-glycoprotein inhibitior + 0.7642 76.42%
P-glycoprotein substrate - 0.6390 63.90%
CYP3A4 substrate + 0.7246 72.46%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8966 89.66%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7345 73.45%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9054 90.54%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.8448 84.48%
Human Ether-a-go-go-Related Gene inhibition + 0.6725 67.25%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8545 85.45%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.7014 70.14%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.8093 80.93%
Androgen receptor binding + 0.7475 74.75%
Thyroid receptor binding - 0.5721 57.21%
Glucocorticoid receptor binding + 0.7393 73.93%
Aromatase binding + 0.6415 64.15%
PPAR gamma + 0.8032 80.32%
Honey bee toxicity - 0.6554 65.54%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.04% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.76% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.71% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.96% 86.33%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 88.89% 93.00%
CHEMBL221 P23219 Cyclooxygenase-1 88.55% 90.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.29% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.69% 95.89%
CHEMBL2581 P07339 Cathepsin D 86.55% 98.95%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 85.67% 89.44%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 84.05% 96.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.83% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.42% 94.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.19% 97.09%
CHEMBL5028 O14672 ADAM10 83.15% 97.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.10% 89.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.45% 100.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 82.23% 95.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.03% 99.17%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gymnema sylvestre

Cross-Links

Top
PubChem 10795795
LOTUS LTS0226441
wikiData Q105118542