(3S,5S,8R,9S,10S,13R,14S,17R)-5,14-dihydroxy-3-[(2S,4R,5S,6S)-4-methoxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyoxan-2-yl]oxy-13-methyl-17-(5-oxo-2H-furan-3-yl)-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid

Details

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Internal ID 462fc115-228b-4458-8d77-d15756cee90f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Cardenolides and derivatives > Cardenolide glycosides and derivatives
IUPAC Name (3S,5S,8R,9S,10S,13R,14S,17R)-5,14-dihydroxy-3-[(2S,4R,5S,6S)-4-methoxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyoxan-2-yl]oxy-13-methyl-17-(5-oxo-2H-furan-3-yl)-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid
SMILES (Canonical) CC1C(C(CC(O1)OC2CCC3(C4CCC5(C(CCC5(C4CCC3(C2)O)O)C6=CC(=O)OC6)C)C(=O)O)OC)OC7C(C(C(C(O7)COC8C(C(C(C(O8)CO)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@@H](C[C@H](O1)O[C@H]2CC[C@@]3([C@H]4CC[C@@]5([C@H](CC[C@@]5([C@@H]4CC[C@@]3(C2)O)O)C6=CC(=O)OC6)C)C(=O)O)OC)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO[C@@H]8[C@H]([C@@H]([C@H]([C@@H](O8)CO)O)O)O)O)O)O
InChI InChI=1S/C42H64O20/c1-18-35(62-37-34(50)32(48)30(46)26(61-37)17-57-36-33(49)31(47)29(45)25(15-43)60-36)24(55-3)13-28(58-18)59-20-4-10-41(38(51)52)22-5-8-39(2)21(19-12-27(44)56-16-19)7-11-42(39,54)23(22)6-9-40(41,53)14-20/h12,18,20-26,28-37,43,45-50,53-54H,4-11,13-17H2,1-3H3,(H,51,52)/t18-,20-,21+,22-,23+,24+,25-,26+,28+,29-,30+,31+,32-,33-,34+,35-,36-,37-,39+,40-,41+,42-/m0/s1
InChI Key XBQOQVUCVQINTM-XEMFACPESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C42H64O20
Molecular Weight 888.90 g/mol
Exact Mass 888.39909443 g/mol
Topological Polar Surface Area (TPSA) 310.00 Ų
XlogP -2.80
Atomic LogP (AlogP) -2.03
H-Bond Acceptor 19
H-Bond Donor 10
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,5S,8R,9S,10S,13R,14S,17R)-5,14-dihydroxy-3-[(2S,4R,5S,6S)-4-methoxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyoxan-2-yl]oxy-13-methyl-17-(5-oxo-2H-furan-3-yl)-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7964 79.64%
Caco-2 - 0.8886 88.86%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.8047 80.47%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8874 88.74%
OATP1B3 inhibitior + 0.9615 96.15%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8593 85.93%
P-glycoprotein inhibitior + 0.7406 74.06%
P-glycoprotein substrate + 0.7211 72.11%
CYP3A4 substrate + 0.7333 73.33%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8995 89.95%
CYP3A4 inhibition - 0.8841 88.41%
CYP2C9 inhibition - 0.9054 90.54%
CYP2C19 inhibition - 0.9238 92.38%
CYP2D6 inhibition - 0.9467 94.67%
CYP1A2 inhibition - 0.9221 92.21%
CYP2C8 inhibition + 0.5996 59.96%
CYP inhibitory promiscuity - 0.9513 95.13%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5527 55.27%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9151 91.51%
Skin irritation - 0.5611 56.11%
Skin corrosion - 0.9387 93.87%
Ames mutagenesis - 0.6240 62.40%
Human Ether-a-go-go-Related Gene inhibition + 0.8104 81.04%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.7602 76.02%
skin sensitisation - 0.9209 92.09%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.8574 85.74%
Acute Oral Toxicity (c) I 0.8305 83.05%
Estrogen receptor binding + 0.8572 85.72%
Androgen receptor binding + 0.7842 78.42%
Thyroid receptor binding - 0.6249 62.49%
Glucocorticoid receptor binding + 0.7160 71.60%
Aromatase binding + 0.7079 70.79%
PPAR gamma + 0.7833 78.33%
Honey bee toxicity - 0.6770 67.70%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9314 93.14%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.86% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.48% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.35% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.97% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.56% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.89% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.51% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 88.18% 92.50%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.73% 96.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.84% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.72% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.70% 99.23%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.30% 96.77%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.79% 94.33%
CHEMBL2581 P07339 Cathepsin D 84.57% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 83.76% 95.93%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.67% 95.89%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.62% 97.36%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 81.41% 94.23%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 81.35% 81.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.15% 89.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.08% 97.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.99% 94.00%
CHEMBL1871 P10275 Androgen Receptor 80.18% 96.43%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Strophanthus kombe

Cross-Links

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PubChem 163101467
LOTUS LTS0252347
wikiData Q105324631