(E)-N-[1-[(2S,4S,5R,6R)-5-[(2S,3R,4S,5R,6S)-5-(dimethylamino)-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4-hydroxy-6-methyloxan-2-yl]-2-oxopyrimidin-4-yl]-3-methylsulfanylprop-2-enamide

Details

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Internal ID 50a1baba-77f2-4c4d-b537-033b59a358d9
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (E)-N-[1-[(2S,4S,5R,6R)-5-[(2S,3R,4S,5R,6S)-5-(dimethylamino)-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4-hydroxy-6-methyloxan-2-yl]-2-oxopyrimidin-4-yl]-3-methylsulfanylprop-2-enamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H34N4O8S/c1-11-17(25(3)4)18(29)19(30)21(33-11)34-20-12(2)32-16(10-13(20)27)26-8-6-14(24-22(26)31)23-15(28)7-9-35-5/h6-9,11-13,16-21,27,29-30H,10H2,1-5H3,(H,23,24,28,31)/b9-7+/t11-,12+,13-,16-,17-,18-,19+,20-,21-/m0/s1
InChI Key OEIFFRHFKRNPAL-DWROEDOGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C22H34N4O8S
Molecular Weight 514.60 g/mol
Exact Mass 514.20973523 g/mol
Topological Polar Surface Area (TPSA) 179.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -0.49
H-Bond Acceptor 12
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (E)-N-[1-[(2S,4S,5R,6R)-5-[(2S,3R,4S,5R,6S)-5-(dimethylamino)-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4-hydroxy-6-methyloxan-2-yl]-2-oxopyrimidin-4-yl]-3-methylsulfanylprop-2-enamide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8492 84.92%
Caco-2 - 0.8240 82.40%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.4623 46.23%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9025 90.25%
OATP1B3 inhibitior + 0.9349 93.49%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9567 95.67%
BSEP inhibitior + 0.6453 64.53%
P-glycoprotein inhibitior - 0.4801 48.01%
P-glycoprotein substrate + 0.5095 50.95%
CYP3A4 substrate + 0.6873 68.73%
CYP2C9 substrate - 0.5989 59.89%
CYP2D6 substrate - 0.8413 84.13%
CYP3A4 inhibition - 0.8841 88.41%
CYP2C9 inhibition - 0.7508 75.08%
CYP2C19 inhibition - 0.7428 74.28%
CYP2D6 inhibition - 0.9100 91.00%
CYP1A2 inhibition - 0.8092 80.92%
CYP2C8 inhibition + 0.4676 46.76%
CYP inhibitory promiscuity - 0.9446 94.46%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.6700 67.00%
Carcinogenicity (trinary) Non-required 0.5603 56.03%
Eye corrosion - 0.9847 98.47%
Eye irritation - 0.9556 95.56%
Skin irritation - 0.7900 79.00%
Skin corrosion - 0.9369 93.69%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6708 67.08%
Micronuclear + 0.8400 84.00%
Hepatotoxicity + 0.7122 71.22%
skin sensitisation - 0.8695 86.95%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity + 0.5694 56.94%
Acute Oral Toxicity (c) III 0.6915 69.15%
Estrogen receptor binding + 0.7617 76.17%
Androgen receptor binding + 0.7626 76.26%
Thyroid receptor binding + 0.6782 67.82%
Glucocorticoid receptor binding + 0.6461 64.61%
Aromatase binding + 0.6891 68.91%
PPAR gamma + 0.7257 72.57%
Honey bee toxicity - 0.7123 71.23%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 0.7110 71.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.67% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.01% 96.09%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 93.80% 93.10%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.56% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.07% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.66% 89.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 90.24% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.64% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.12% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 86.52% 94.73%
CHEMBL2581 P07339 Cathepsin D 86.04% 98.95%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 85.93% 91.83%
CHEMBL4208 P20618 Proteasome component C5 85.23% 90.00%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 83.87% 98.99%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 83.41% 94.42%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 82.65% 81.11%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.17% 95.64%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.15% 95.56%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.55% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162981987
LOTUS LTS0051049
wikiData Q105190288