Duramycin B

Details

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Internal ID bf87f33e-e52b-4817-b216-d922d3beaf51
Taxonomy Organic acids and derivatives > Peptidomimetics > Hybrid peptides
IUPAC Name (1S,4S,13S,16S,19S,22S,25S,28R,31S,37S,40S,41S,44R,47S,50S,53S,56R,65S,70S)-44-amino-4,22-dibenzyl-47-(3-carbamimidamidopropyl)-31-[(R)-carboxy(hydroxy)methyl]-2,5,14,17,20,23,26,29,32,35,38,45,48,51,54,57,67-heptadecahydroxy-37-(2-hydroxy-2-iminoethyl)-50-(3-hydroxy-3-iminopropyl)-41,70-dimethyl-16-(2-methylpropyl)-8-oxo-25-propan-2-yl-42,69,72-trithia-3,6,9,15,18,21,24,27,30,33,36,39,46,49,52,55,58,60,66-nonadecazapentacyclo[38.18.9.319,56.328,53.09,13]triheptaconta-2,5,14,17,20,23,26,29,32,35,38,45,48,51,54,57,66-heptadecaene-65-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C86H127N25O25S3/c1-40(2)29-50-72(121)108-65-43(6)139-39-57-77(126)103-54(75(124)100-51(30-44-17-9-7-10-18-44)69(118)95-35-62(115)111-28-16-23-58(111)79(128)101-50)33-92-26-14-13-21-49(84(133)134)99-82(131)64-42(5)138-36-46(87)68(117)97-47(22-15-27-93-86(90)91)70(119)98-48(24-25-59(88)112)71(120)104-55(76(125)105-57)37-137-38-56(106-81(130)63(41(3)4)107-73(122)52(102-83(65)132)31-45-19-11-8-12-20-45)78(127)110-66(67(116)85(135)136)80(129)94-34-61(114)96-53(32-60(89)113)74(123)109-64/h7-12,17-20,40-43,46-58,63-67,92,116H,13-16,21-39,87H2,1-6H3,(H2,88,112)(H2,89,113)(H,94,129)(H,95,118)(H,96,114)(H,97,117)(H,98,119)(H,99,131)(H,100,124)(H,101,128)(H,102,132)(H,103,126)(H,104,120)(H,105,125)(H,106,130)(H,107,122)(H,108,121)(H,109,123)(H,110,127)(H,133,134)(H,135,136)(H4,90,91,93)/t42-,43-,46-,47-,48-,49-,50-,51-,52-,53-,54-,55+,56-,57-,58-,63-,64+,65+,66-,67+/m0/s1
InChI Key ZHLSUKYWIDCDAA-JCDXYFDJSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C86H127N25O25S3
Molecular Weight 2007.30 g/mol
Exact Mass 2005.8597082 g/mol
Topological Polar Surface Area (TPSA) 933.00 Ų
XlogP -2.60
Atomic LogP (AlogP) 6.11
H-Bond Acceptor 29
H-Bond Donor 29
Rotatable Bonds 19

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Duramycin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5762 57.62%
Caco-2 - 0.8570 85.70%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Lysosomes 0.4710 47.10%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8123 81.23%
OATP1B3 inhibitior + 0.9344 93.44%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.9539 95.39%
P-glycoprotein inhibitior + 0.7417 74.17%
P-glycoprotein substrate + 0.8657 86.57%
CYP3A4 substrate + 0.7540 75.40%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7899 78.99%
CYP3A4 inhibition - 0.9427 94.27%
CYP2C9 inhibition - 0.8225 82.25%
CYP2C19 inhibition - 0.7788 77.88%
CYP2D6 inhibition - 0.8853 88.53%
CYP1A2 inhibition - 0.8802 88.02%
CYP2C8 inhibition + 0.8486 84.86%
CYP inhibitory promiscuity - 0.9736 97.36%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5909 59.09%
Eye corrosion - 0.9847 98.47%
Eye irritation - 0.8953 89.53%
Skin irritation - 0.7580 75.80%
Skin corrosion - 0.9207 92.07%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7081 70.81%
Micronuclear + 0.8100 81.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.8347 83.47%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.9173 91.73%
Acute Oral Toxicity (c) III 0.5631 56.31%
Estrogen receptor binding - 0.6174 61.74%
Androgen receptor binding + 0.7686 76.86%
Thyroid receptor binding + 0.8218 82.18%
Glucocorticoid receptor binding + 0.8514 85.14%
Aromatase binding + 0.8134 81.34%
PPAR gamma + 0.7938 79.38%
Honey bee toxicity - 0.6394 63.94%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9407 94.07%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.94% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.57% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.92% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.62% 97.09%
CHEMBL4040 P28482 MAP kinase ERK2 97.53% 83.82%
CHEMBL228 P31645 Serotonin transporter 96.18% 95.51%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 96.12% 90.71%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 96.03% 95.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.90% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 95.76% 90.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.21% 85.14%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 94.96% 97.64%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 93.64% 93.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.85% 99.23%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.61% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.92% 86.33%
CHEMBL2535 P11166 Glucose transporter 90.50% 98.75%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.56% 90.08%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.31% 95.89%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 89.22% 98.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.89% 93.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.73% 99.17%
CHEMBL2514 O95665 Neurotensin receptor 2 87.92% 100.00%
CHEMBL222 P23975 Norepinephrine transporter 86.60% 96.06%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 86.04% 82.38%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.02% 96.21%
CHEMBL4227 P25090 Lipoxin A4 receptor 85.12% 100.00%
CHEMBL3384 Q16512 Protein kinase N1 84.89% 80.71%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.89% 95.50%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 83.34% 93.03%
CHEMBL4208 P20618 Proteasome component C5 83.32% 90.00%
CHEMBL1914 P06276 Butyrylcholinesterase 83.04% 95.00%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 82.89% 88.00%
CHEMBL1744525 P43490 Nicotinamide phosphoribosyltransferase 82.89% 96.25%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 82.37% 85.00%
CHEMBL284 P27487 Dipeptidyl peptidase IV 81.30% 95.69%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.29% 95.89%
CHEMBL1902 P62942 FK506-binding protein 1A 80.14% 97.05%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 101611010
LOTUS LTS0169606
wikiData Q105375836