4-(1,3-Benzodioxol-5-ylmethyl)-3-[[6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3-benzodioxol-5-yl]methyl]oxolan-2-one

Details

Top
Internal ID abbdbff2-738a-4038-a429-464242e548ea
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name 4-(1,3-benzodioxol-5-ylmethyl)-3-[[6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3-benzodioxol-5-yl]methyl]oxolan-2-one
SMILES (Canonical) C1C(C(C(=O)O1)CC2=CC3=C(C=C2OC4C(C(C(C(O4)CO)O)O)O)OCO3)CC5=CC6=C(C=C5)OCO6
SMILES (Isomeric) C1C(C(C(=O)O1)CC2=CC3=C(C=C2OC4C(C(C(C(O4)CO)O)O)O)OCO3)CC5=CC6=C(C=C5)OCO6
InChI InChI=1S/C26H28O12/c27-8-21-22(28)23(29)24(30)26(38-21)37-17-7-20-19(35-11-36-20)6-13(17)5-15-14(9-32-25(15)31)3-12-1-2-16-18(4-12)34-10-33-16/h1-2,4,6-7,14-15,21-24,26-30H,3,5,8-11H2
InChI Key NAGPHNGRNKMFGK-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C26H28O12
Molecular Weight 532.50 g/mol
Exact Mass 532.15807632 g/mol
Topological Polar Surface Area (TPSA) 163.00 Ų
XlogP 1.50
Atomic LogP (AlogP) -0.10
H-Bond Acceptor 12
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 4-(1,3-Benzodioxol-5-ylmethyl)-3-[[6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3-benzodioxol-5-yl]methyl]oxolan-2-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5714 57.14%
Caco-2 - 0.8954 89.54%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.6709 67.09%
OATP2B1 inhibitior - 0.8527 85.27%
OATP1B1 inhibitior + 0.8973 89.73%
OATP1B3 inhibitior + 0.9505 95.05%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.8791 87.91%
P-glycoprotein inhibitior - 0.4676 46.76%
P-glycoprotein substrate - 0.8037 80.37%
CYP3A4 substrate + 0.5802 58.02%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8561 85.61%
CYP3A4 inhibition + 0.5086 50.86%
CYP2C9 inhibition - 0.9119 91.19%
CYP2C19 inhibition - 0.6935 69.35%
CYP2D6 inhibition - 0.7902 79.02%
CYP1A2 inhibition - 0.8451 84.51%
CYP2C8 inhibition - 0.7201 72.01%
CYP inhibitory promiscuity - 0.6651 66.51%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6117 61.17%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9178 91.78%
Skin irritation - 0.8135 81.35%
Skin corrosion - 0.9584 95.84%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6545 65.45%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.8492 84.92%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.6098 60.98%
Acute Oral Toxicity (c) III 0.5194 51.94%
Estrogen receptor binding + 0.7978 79.78%
Androgen receptor binding + 0.6094 60.94%
Thyroid receptor binding - 0.5843 58.43%
Glucocorticoid receptor binding - 0.6311 63.11%
Aromatase binding - 0.5481 54.81%
PPAR gamma + 0.7165 71.65%
Honey bee toxicity - 0.6974 69.74%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.6649 66.49%
Fish aquatic toxicity + 0.9408 94.08%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.89% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.60% 91.11%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 98.03% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.57% 94.45%
CHEMBL2581 P07339 Cathepsin D 96.08% 98.95%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 93.25% 94.80%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.57% 96.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 91.23% 92.62%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.51% 97.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.38% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 88.07% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.05% 95.89%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.70% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.54% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.44% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.04% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.04% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.99% 96.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.03% 95.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Leucothoe grayana
Rhododendron decorum
Schisandra rubriflora

Cross-Links

Top
PubChem 162980147
LOTUS LTS0134667
wikiData Q105245944