(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[10-(hydroxymethyl)-4,4,8,14-tetramethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol

Details

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Internal ID dca73870-3f2a-45bc-9d82-e605da592670
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[10-(hydroxymethyl)-4,4,8,14-tetramethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(C)(C1CCC2(C1CCC3C2(CCC4C3(CCC(C4(C)C)OC5C(C(C(C(O5)CO)O)O)O)CO)C)C)OC6C(C(C(C(O6)CO)O)O)O)C
SMILES (Isomeric) CC(=CCCC(C)(C1CCC2(C1CCC3C2(CCC4C3(CCC(C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)CO)C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C
InChI InChI=1S/C42H72O13/c1-22(2)9-8-15-41(7,55-37-35(51)33(49)31(47)26(20-44)53-37)24-12-16-39(5)23(24)10-11-28-40(39,6)17-13-27-38(3,4)29(14-18-42(27,28)21-45)54-36-34(50)32(48)30(46)25(19-43)52-36/h9,23-37,43-51H,8,10-21H2,1-7H3/t23?,24?,25-,26-,27?,28?,29?,30-,31-,32+,33+,34-,35-,36+,37+,39?,40?,41?,42?/m1/s1
InChI Key YRUYJWYBNXTLOE-FEBSBVFDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C42H72O13
Molecular Weight 785.00 g/mol
Exact Mass 784.49729235 g/mol
Topological Polar Surface Area (TPSA) 219.00 Ų
XlogP 4.10
Atomic LogP (AlogP) 2.15
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[10-(hydroxymethyl)-4,4,8,14-tetramethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6382 63.82%
Caco-2 - 0.8813 88.13%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7733 77.33%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8328 83.28%
OATP1B3 inhibitior - 0.2200 22.00%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.6442 64.42%
P-glycoprotein inhibitior + 0.7957 79.57%
P-glycoprotein substrate - 0.7889 78.89%
CYP3A4 substrate + 0.6989 69.89%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9655 96.55%
CYP2C9 inhibition - 0.8609 86.09%
CYP2C19 inhibition - 0.8930 89.30%
CYP2D6 inhibition - 0.9379 93.79%
CYP1A2 inhibition - 0.8844 88.44%
CYP2C8 inhibition + 0.6705 67.05%
CYP inhibitory promiscuity - 0.8975 89.75%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6539 65.39%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9117 91.17%
Skin irritation - 0.6432 64.32%
Skin corrosion - 0.9504 95.04%
Ames mutagenesis - 0.7570 75.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7959 79.59%
Micronuclear - 0.8900 89.00%
Hepatotoxicity + 0.5342 53.42%
skin sensitisation - 0.9031 90.31%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity - 0.6500 65.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.4516 45.16%
Estrogen receptor binding + 0.7087 70.87%
Androgen receptor binding + 0.7505 75.05%
Thyroid receptor binding - 0.5658 56.58%
Glucocorticoid receptor binding + 0.6377 63.77%
Aromatase binding + 0.6762 67.62%
PPAR gamma + 0.7247 72.47%
Honey bee toxicity - 0.5459 54.59%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9438 94.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.57% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.87% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.48% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.85% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.55% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.48% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.24% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.13% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.06% 92.94%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 87.54% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.43% 95.50%
CHEMBL259 P32245 Melanocortin receptor 4 85.50% 95.38%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.97% 100.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.87% 97.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.85% 99.17%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.64% 93.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.61% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.24% 91.24%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.93% 92.62%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.67% 95.71%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 81.60% 91.03%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 81.43% 92.88%
CHEMBL2581 P07339 Cathepsin D 81.16% 98.95%
CHEMBL3286 P00749 Urokinase-type plasminogen activator 80.56% 97.88%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gynostemma pentaphyllum

Cross-Links

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PubChem 11968551
NPASS NPC311726
LOTUS LTS0158180
wikiData Q105353118