Staphcoccomycin

Details

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Internal ID 935ef133-423c-44ca-9dc6-9abdf87d4b2b
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name 2-[(1S,2R,3R,7R,8S,9R,10R,12R,14E,16R)-9-[(2S,4S,5R,6R)-4-(dimethylamino)-5-hydroxy-6-methyloxan-2-yl]oxy-3-ethyl-7-hydroxy-2-[[(2S,3S,4R,5S,6S)-5-hydroxy-3,4-dimethoxy-6-methyloxan-2-yl]oxymethyl]-8,12,16-trimethyl-5,13-dioxo-4,17-dioxabicyclo[14.1.0]heptadec-14-en-10-yl]acetaldehyde
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C39H65NO14/c1-11-29-25(19-49-38-36(48-10)35(47-9)33(46)23(5)51-38)37-39(6,54-37)14-12-27(42)20(2)16-24(13-15-41)34(21(3)28(43)18-30(44)52-29)53-31-17-26(40(7)8)32(45)22(4)50-31/h12,14-15,20-26,28-29,31-38,43,45-46H,11,13,16-19H2,1-10H3/b14-12+/t20-,21+,22-,23+,24+,25-,26+,28-,29-,31-,32+,33+,34+,35-,36+,37+,38+,39-/m1/s1
InChI Key LKWYVXHWASIBBX-URAUPONDSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C39H65NO14
Molecular Weight 771.90 g/mol
Exact Mass 771.44050575 g/mol
Topological Polar Surface Area (TPSA) 192.00 Ų
XlogP 1.10
Atomic LogP (AlogP) 1.80
H-Bond Acceptor 15
H-Bond Donor 3
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Staphcoccomycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8671 86.71%
Caco-2 - 0.8643 86.43%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.4462 44.62%
OATP2B1 inhibitior - 0.8677 86.77%
OATP1B1 inhibitior + 0.8565 85.65%
OATP1B3 inhibitior + 0.8223 82.23%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8247 82.47%
P-glycoprotein inhibitior + 0.7658 76.58%
P-glycoprotein substrate + 0.8153 81.53%
CYP3A4 substrate + 0.7144 71.44%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8667 86.67%
CYP3A4 inhibition - 0.6777 67.77%
CYP2C9 inhibition - 0.8962 89.62%
CYP2C19 inhibition - 0.8934 89.34%
CYP2D6 inhibition - 0.9170 91.70%
CYP1A2 inhibition - 0.9170 91.70%
CYP2C8 inhibition + 0.6412 64.12%
CYP inhibitory promiscuity - 0.9689 96.89%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5341 53.41%
Eye corrosion - 0.9866 98.66%
Eye irritation - 0.9178 91.78%
Skin irritation - 0.7736 77.36%
Skin corrosion - 0.9299 92.99%
Ames mutagenesis - 0.6554 65.54%
Human Ether-a-go-go-Related Gene inhibition - 0.3786 37.86%
Micronuclear + 0.6400 64.00%
Hepatotoxicity + 0.7218 72.18%
skin sensitisation - 0.8532 85.32%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.9403 94.03%
Acute Oral Toxicity (c) I 0.5564 55.64%
Estrogen receptor binding + 0.6844 68.44%
Androgen receptor binding + 0.6259 62.59%
Thyroid receptor binding - 0.5520 55.20%
Glucocorticoid receptor binding + 0.7145 71.45%
Aromatase binding + 0.5334 53.34%
PPAR gamma + 0.7135 71.35%
Honey bee toxicity - 0.6237 62.37%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.7100 71.00%
Fish aquatic toxicity + 0.8982 89.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.07% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.92% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.34% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.93% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.46% 89.00%
CHEMBL233 P35372 Mu opioid receptor 92.91% 97.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.91% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.74% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 91.57% 95.93%
CHEMBL2996 Q05655 Protein kinase C delta 87.42% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.57% 86.33%
CHEMBL221 P23219 Cyclooxygenase-1 86.23% 90.17%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.20% 92.94%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.76% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.59% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.16% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 85.01% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.24% 97.25%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.03% 96.00%
CHEMBL255 P29275 Adenosine A2b receptor 82.01% 98.59%
CHEMBL340 P08684 Cytochrome P450 3A4 81.56% 91.19%
CHEMBL5957 P21589 5'-nucleotidase 81.52% 97.78%
CHEMBL5103 Q969S8 Histone deacetylase 10 80.07% 90.08%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589117
LOTUS LTS0145353
wikiData Q105153325