(3R)-5-methoxy-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3H-benzo[f][2]benzofuran-1-one

Details

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Internal ID 35f01f87-99d8-42f5-b63e-6ca15b40cfcd
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (3R)-5-methoxy-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3H-benzo[f][2]benzofuran-1-one
SMILES (Canonical) CC1C2=C(C=C3C=CC=C(C3=C2OC4C(C(C(C(O4)CO)O)O)O)OC)C(=O)O1
SMILES (Isomeric) C[C@@H]1C2=C(C=C3C=CC=C(C3=C2O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)OC)C(=O)O1
InChI InChI=1S/C20H22O9/c1-8-13-10(19(25)27-8)6-9-4-3-5-11(26-2)14(9)18(13)29-20-17(24)16(23)15(22)12(7-21)28-20/h3-6,8,12,15-17,20-24H,7H2,1-2H3/t8-,12-,15-,16+,17-,20+/m1/s1
InChI Key FKFDDEWUPQUBNO-RUBISPBQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H22O9
Molecular Weight 406.40 g/mol
Exact Mass 406.12638228 g/mol
Topological Polar Surface Area (TPSA) 135.00 Ų
XlogP 0.80
Atomic LogP (AlogP) 0.26
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R)-5-methoxy-3-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3H-benzo[f][2]benzofuran-1-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5591 55.91%
Caco-2 - 0.8182 81.82%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6422 64.22%
OATP2B1 inhibitior - 0.7163 71.63%
OATP1B1 inhibitior + 0.8516 85.16%
OATP1B3 inhibitior + 0.9600 96.00%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.5922 59.22%
P-glycoprotein inhibitior - 0.7262 72.62%
P-glycoprotein substrate - 0.7747 77.47%
CYP3A4 substrate + 0.6077 60.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.7995 79.95%
CYP2C9 inhibition - 0.8619 86.19%
CYP2C19 inhibition - 0.8062 80.62%
CYP2D6 inhibition - 0.8795 87.95%
CYP1A2 inhibition - 0.8577 85.77%
CYP2C8 inhibition - 0.6104 61.04%
CYP inhibitory promiscuity - 0.5963 59.63%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6336 63.36%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9333 93.33%
Skin irritation - 0.8251 82.51%
Skin corrosion - 0.9578 95.78%
Ames mutagenesis + 0.6526 65.26%
Human Ether-a-go-go-Related Gene inhibition - 0.4238 42.38%
Micronuclear + 0.6433 64.33%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.8742 87.42%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.5570 55.70%
Acute Oral Toxicity (c) III 0.7161 71.61%
Estrogen receptor binding + 0.7192 71.92%
Androgen receptor binding - 0.4846 48.46%
Thyroid receptor binding - 0.5662 56.62%
Glucocorticoid receptor binding + 0.7055 70.55%
Aromatase binding - 0.4936 49.36%
PPAR gamma - 0.4837 48.37%
Honey bee toxicity - 0.8255 82.55%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.7646 76.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.33% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.52% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.21% 94.00%
CHEMBL2581 P07339 Cathepsin D 93.40% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.16% 86.33%
CHEMBL220 P22303 Acetylcholinesterase 92.79% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.48% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.16% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.58% 96.00%
CHEMBL2535 P11166 Glucose transporter 88.80% 98.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.19% 89.00%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 84.09% 94.03%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.39% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.13% 85.14%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.08% 86.92%
CHEMBL3401 O75469 Pregnane X receptor 80.45% 94.73%
CHEMBL1255126 O15151 Protein Mdm4 80.28% 90.20%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Sisyrinchium palmifolium

Cross-Links

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PubChem 101709341
LOTUS LTS0230747
wikiData Q104996574