3-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,14-tetramethyl-17-[(1S)-5-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhex-4-enyl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carbaldehyde

Details

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Internal ID cf6747b8-1dbd-4cab-9370-9ede72f3a18b
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name 3-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,14-tetramethyl-17-[(1S)-5-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhex-4-enyl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carbaldehyde
SMILES (Canonical) CC(=CCCC(C1CCC2(C1CCC3C2(CCC4C3(CCC(C4(C)C)OC5C(C(C(CO5)O)O)OC6C(C(C(C(O6)CO)O)O)O)C=O)C)C)OC7C(C(C(C(O7)CO)O)O)O)C
SMILES (Isomeric) CC(=CCC[C@@H](C1CCC2(C1CCC3C2(CCC4C3(CCC(C4(C)C)O[C@H]5[C@@H]([C@H]([C@H](CO5)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C=O)C)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C
InChI InChI=1S/C46H76O17/c1-22(2)8-7-9-26(59-40-37(56)35(54)33(52)27(18-47)60-40)23-12-15-44(5)24(23)10-11-30-45(44,6)16-13-29-43(3,4)31(14-17-46(29,30)21-49)62-42-39(32(51)25(50)20-58-42)63-41-38(57)36(55)34(53)28(19-48)61-41/h8,21,23-42,47-48,50-57H,7,9-20H2,1-6H3/t23?,24?,25-,26-,27+,28+,29?,30?,31?,32-,33+,34+,35-,36-,37+,38+,39+,40+,41-,42-,44?,45?,46?/m0/s1
InChI Key IROUVKVGJYDVOC-SDTLMHBVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C46H76O17
Molecular Weight 901.10 g/mol
Exact Mass 900.50825095 g/mol
Topological Polar Surface Area (TPSA) 275.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 0.43
H-Bond Acceptor 17
H-Bond Donor 10
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(2S,3R,4S,5S)-4,5-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,14-tetramethyl-17-[(1S)-5-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhex-4-enyl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carbaldehyde

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7719 77.19%
Caco-2 - 0.8899 88.99%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8134 81.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8192 81.92%
OATP1B3 inhibitior - 0.2428 24.28%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6776 67.76%
BSEP inhibitior + 0.8891 88.91%
P-glycoprotein inhibitior + 0.7502 75.02%
P-glycoprotein substrate - 0.5297 52.97%
CYP3A4 substrate + 0.7368 73.68%
CYP2C9 substrate - 0.8022 80.22%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition - 0.9469 94.69%
CYP2C9 inhibition - 0.8637 86.37%
CYP2C19 inhibition - 0.9118 91.18%
CYP2D6 inhibition - 0.9391 93.91%
CYP1A2 inhibition - 0.9069 90.69%
CYP2C8 inhibition + 0.6467 64.67%
CYP inhibitory promiscuity - 0.9514 95.14%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6516 65.16%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9073 90.73%
Skin irritation - 0.5512 55.12%
Skin corrosion - 0.9480 94.80%
Ames mutagenesis - 0.5948 59.48%
Human Ether-a-go-go-Related Gene inhibition + 0.7958 79.58%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.6880 68.80%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.5763 57.63%
Acute Oral Toxicity (c) I 0.4409 44.09%
Estrogen receptor binding + 0.7891 78.91%
Androgen receptor binding + 0.7607 76.07%
Thyroid receptor binding - 0.5493 54.93%
Glucocorticoid receptor binding + 0.6760 67.60%
Aromatase binding + 0.6286 62.86%
PPAR gamma + 0.7452 74.52%
Honey bee toxicity - 0.5761 57.61%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5955 59.55%
Fish aquatic toxicity + 0.9413 94.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.59% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.68% 96.09%
CHEMBL233 P35372 Mu opioid receptor 92.72% 97.93%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 92.06% 91.24%
CHEMBL325 Q13547 Histone deacetylase 1 91.37% 95.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.22% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 90.65% 94.75%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.37% 96.61%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 89.06% 92.88%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 88.74% 95.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.82% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.22% 97.09%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.87% 92.86%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 86.16% 92.78%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.02% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.41% 97.25%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.19% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 85.08% 94.33%
CHEMBL2581 P07339 Cathepsin D 84.65% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 84.29% 95.93%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 83.69% 95.58%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.60% 96.38%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.22% 95.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.86% 99.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.66% 95.89%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.37% 92.62%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.29% 97.14%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.20% 97.50%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.77% 97.36%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.73% 97.29%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gynostemma pentaphyllum

Cross-Links

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PubChem 6325319
NPASS NPC292821
LOTUS LTS0147493
wikiData Q105118996