(2S,3S,5S)-2-(carboxymethyl)-8-nonyl-9-oxo-1,6-dioxaspiro(4.4)non-7-ene-2,3-dicarboxylic acid

Details

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Internal ID 2b710215-f391-4ce3-aef7-bbdec1ec45df
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Tricarboxylic acids and derivatives
IUPAC Name (2S,3S,5S)-2-(carboxymethyl)-8-nonyl-9-oxo-1,6-dioxaspiro[4.4]non-7-ene-2,3-dicarboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H28O9/c1-2-3-4-5-6-7-8-9-13-12-28-20(16(13)23)10-14(17(24)25)19(29-20,18(26)27)11-15(21)22/h12,14H,2-11H2,1H3,(H,21,22)(H,24,25)(H,26,27)/t14-,19+,20+/m1/s1
InChI Key LQLCHKHILFZNKF-UAOJZALGSA-N
Popularity 11 references in papers

Physical and Chemical Properties

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Molecular Formula C20H28O9
Molecular Weight 412.40 g/mol
Exact Mass 412.17333247 g/mol
Topological Polar Surface Area (TPSA) 147.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 2.73
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 12

Synonyms

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U32USC3QC2
Trachyspic acid, (+/-)-
UNII-U32USC3QC2
CHEMBL5175115
512808-12-7
1,6-Dioxaspiro(4.4)non-7-ene-2,3-dicarboxylic acid, 2-(carboxymethyl)-8-nonyl-9-oxo-, (2R,3R,5R)-rel-
Rel-(2R,3R,5R)-2-(carboxymethyl)-8-nonyl-9-oxo-1,6-dioxaspiro(4.4)non-7-ene-2,3-dicarboxylic acid
(+)-Trachyspic acid
1,6-Dioxaspiro[4.4]non-7-ene-2,3-dicarboxylic acid, 2-(carboxymethyl)-8-nonyl-9-oxo-, (2R,3R,5R)-rel-
rel-(2R,3R,5R)-2-(Carboxymethyl)-8-nonyl-9-oxo-1,6-dioxaspiro[4.4]non-7-ene-2,3-dicarboxylic acid
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (2S,3S,5S)-2-(carboxymethyl)-8-nonyl-9-oxo-1,6-dioxaspiro(4.4)non-7-ene-2,3-dicarboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9661 96.61%
Caco-2 - 0.7593 75.93%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7422 74.22%
OATP2B1 inhibitior - 0.8588 85.88%
OATP1B1 inhibitior + 0.8473 84.73%
OATP1B3 inhibitior + 0.9196 91.96%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7320 73.20%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior - 0.7034 70.34%
P-glycoprotein substrate - 0.5499 54.99%
CYP3A4 substrate + 0.5721 57.21%
CYP2C9 substrate + 0.6043 60.43%
CYP2D6 substrate - 0.8922 89.22%
CYP3A4 inhibition - 0.6714 67.14%
CYP2C9 inhibition - 0.8633 86.33%
CYP2C19 inhibition - 0.7949 79.49%
CYP2D6 inhibition - 0.9371 93.71%
CYP1A2 inhibition - 0.7439 74.39%
CYP2C8 inhibition - 0.6660 66.60%
CYP inhibitory promiscuity - 0.9629 96.29%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4348 43.48%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.7847 78.47%
Skin irritation + 0.6168 61.68%
Skin corrosion - 0.8843 88.43%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6172 61.72%
Micronuclear - 0.8300 83.00%
Hepatotoxicity + 0.5406 54.06%
skin sensitisation - 0.8592 85.92%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.6628 66.28%
Acute Oral Toxicity (c) III 0.3779 37.79%
Estrogen receptor binding + 0.6582 65.82%
Androgen receptor binding + 0.6202 62.02%
Thyroid receptor binding - 0.5202 52.02%
Glucocorticoid receptor binding + 0.6442 64.42%
Aromatase binding - 0.6038 60.38%
PPAR gamma + 0.5580 55.80%
Honey bee toxicity - 0.9481 94.81%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.6855 68.55%
Fish aquatic toxicity + 0.9730 97.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL221 P23219 Cyclooxygenase-1 97.04% 90.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.75% 97.25%
CHEMBL2581 P07339 Cathepsin D 93.46% 98.95%
CHEMBL4040 P28482 MAP kinase ERK2 92.38% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.07% 91.11%
CHEMBL230 P35354 Cyclooxygenase-2 90.83% 89.63%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.44% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.88% 96.09%
CHEMBL299 P17252 Protein kinase C alpha 88.60% 98.03%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.17% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.59% 99.23%
CHEMBL2996 Q05655 Protein kinase C delta 86.53% 97.79%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.82% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.77% 95.56%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 84.71% 89.34%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 83.04% 92.08%
CHEMBL340 P08684 Cytochrome P450 3A4 81.50% 91.19%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.80% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 11729317
LOTUS LTS0061607
wikiData Q105155600