(+)-Secoisolariciresinoldiglucoside

Details

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Internal ID a32c9a30-5fa9-46de-8b4f-64af5e8fba35
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2R,3R,4S,5S,6R)-2-[(2S,3S)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) COC1=C(C=CC(=C1)CC(COC2C(C(C(C(O2)CO)O)O)O)C(CC3=CC(=C(C=C3)O)OC)COC4C(C(C(C(O4)CO)O)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C[C@H](CO[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)[C@H](CC3=CC(=C(C=C3)O)OC)CO[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O
InChI InChI=1S/C32H46O16/c1-43-21-9-15(3-5-19(21)35)7-17(13-45-31-29(41)27(39)25(37)23(11-33)47-31)18(8-16-4-6-20(36)22(10-16)44-2)14-46-32-30(42)28(40)26(38)24(12-34)48-32/h3-6,9-10,17-18,23-42H,7-8,11-14H2,1-2H3/t17-,18-,23-,24-,25-,26-,27+,28+,29-,30-,31-,32-/m1/s1
InChI Key SBVBJPHMDABKJV-NNSPVXBOSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C32H46O16
Molecular Weight 686.70 g/mol
Exact Mass 686.27858538 g/mol
Topological Polar Surface Area (TPSA) 258.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -2.23
H-Bond Acceptor 16
H-Bond Donor 10
Rotatable Bonds 15

Synonyms

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(+)-SECOISOLARICIRESINOLDIGLUCOSIDE
(S,S)-Secoisolariciresinol diglucoside
CHEMBL2391148
SCHEMBL16307887
AKOS040762641
CS-7895
MS-31119
HY-105008
[(2S,3S)-2,3-Bis(3-methoxy-4-hydroxybenzyl)-1,4-butanediyl]bis(beta-D-glucopyranoside)
(2R,3R,4S,5S,6R)-2-[(2S,3S)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

2D Structure

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2D Structure of (+)-Secoisolariciresinoldiglucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8646 86.46%
Caco-2 - 0.8667 86.67%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6577 65.77%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8606 86.06%
OATP1B3 inhibitior + 0.9622 96.22%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.7208 72.08%
P-glycoprotein inhibitior + 0.6213 62.13%
P-glycoprotein substrate - 0.8070 80.70%
CYP3A4 substrate + 0.5257 52.57%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.7750 77.50%
CYP3A4 inhibition - 0.8844 88.44%
CYP2C9 inhibition - 0.9078 90.78%
CYP2C19 inhibition - 0.8558 85.58%
CYP2D6 inhibition - 0.9070 90.70%
CYP1A2 inhibition - 0.9124 91.24%
CYP2C8 inhibition + 0.5532 55.32%
CYP inhibitory promiscuity - 0.7730 77.30%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6477 64.77%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9228 92.28%
Skin irritation - 0.8616 86.16%
Skin corrosion - 0.9601 96.01%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9098 90.98%
Micronuclear - 0.5041 50.41%
Hepatotoxicity - 0.9324 93.24%
skin sensitisation - 0.8839 88.39%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity - 0.5000 50.00%
Mitochondrial toxicity - 0.7250 72.50%
Nephrotoxicity - 0.8397 83.97%
Acute Oral Toxicity (c) III 0.7362 73.62%
Estrogen receptor binding + 0.7634 76.34%
Androgen receptor binding + 0.6105 61.05%
Thyroid receptor binding + 0.5273 52.73%
Glucocorticoid receptor binding - 0.5436 54.36%
Aromatase binding + 0.5195 51.95%
PPAR gamma + 0.6105 61.05%
Honey bee toxicity - 0.8067 80.67%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5649 56.49%
Fish aquatic toxicity + 0.7238 72.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.52% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.77% 99.17%
CHEMBL2581 P07339 Cathepsin D 93.30% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.81% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.31% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.01% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.66% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.27% 92.62%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.13% 99.15%
CHEMBL3401 O75469 Pregnane X receptor 83.61% 94.73%
CHEMBL1255126 O15151 Protein Mdm4 83.34% 90.20%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.49% 95.56%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.34% 96.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.67% 95.89%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 80.24% 89.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Linum usitatissimum

Cross-Links

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PubChem 72189390
NPASS NPC113680
ChEMBL CHEMBL2391148