(+)-Berbamine 2'-beta-N-oxide

Details

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Internal ID 6d1c07e7-9df6-46ba-a559-e76a9d4914df
Taxonomy Lignans, neolignans and related compounds
IUPAC Name (1S,14R)-20,21,25-trimethoxy-15,30-dimethyl-30-oxido-7,23-dioxa-15-aza-30-azoniaheptacyclo[22.6.2.23,6.18,12.114,18.027,31.022,33]hexatriaconta-3(36),4,6(35),8,10,12(34),18,20,22(33),24,26,31-dodecaen-9-ol
SMILES (Canonical) CN1CCC2=CC(=C(C3=C2C1CC4=CC(=C(C=C4)O)OC5=CC=C(CC6C7=CC(=C(C=C7CC[N+]6(C)[O-])OC)O3)C=C5)OC)OC
SMILES (Isomeric) CN1CCC2=CC(=C(C3=C2[C@H]1CC4=CC(=C(C=C4)O)OC5=CC=C(C[C@H]6C7=CC(=C(C=C7CC[N+]6(C)[O-])OC)O3)C=C5)OC)OC
InChI InChI=1S/C37H40N2O7/c1-38-14-12-25-20-34(43-4)36(44-5)37-35(25)28(38)16-23-8-11-30(40)31(18-23)45-26-9-6-22(7-10-26)17-29-27-21-33(46-37)32(42-3)19-24(27)13-15-39(29,2)41/h6-11,18-21,28-29,40H,12-17H2,1-5H3/t28-,29+,39?/m1/s1
InChI Key TZXVWWTUOOIJJP-YVSHNDLJSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C37H40N2O7
Molecular Weight 624.70 g/mol
Exact Mass 624.28355162 g/mol
Topological Polar Surface Area (TPSA) 87.70 Ų
XlogP 5.80
Atomic LogP (AlogP) 6.87
H-Bond Acceptor 8
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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Berbaman-12-ol, 6,6',7-trimethoxy-2,2'-dimethyl-, 2'-oxide, (2'beta)-
103839-20-9

2D Structure

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2D Structure of (+)-Berbamine 2'-beta-N-oxide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8386 83.86%
Caco-2 - 0.5901 59.01%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Lysosomes 0.3608 36.08%
OATP2B1 inhibitior - 0.8577 85.77%
OATP1B1 inhibitior + 0.9191 91.91%
OATP1B3 inhibitior + 0.9376 93.76%
MATE1 inhibitior - 0.6200 62.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9910 99.10%
P-glycoprotein inhibitior + 0.9198 91.98%
P-glycoprotein substrate + 0.6322 63.22%
CYP3A4 substrate + 0.6999 69.99%
CYP2C9 substrate + 0.7943 79.43%
CYP2D6 substrate + 0.4006 40.06%
CYP3A4 inhibition - 0.7855 78.55%
CYP2C9 inhibition - 0.8829 88.29%
CYP2C19 inhibition - 0.7911 79.11%
CYP2D6 inhibition - 0.8332 83.32%
CYP1A2 inhibition - 0.9294 92.94%
CYP2C8 inhibition + 0.7270 72.70%
CYP inhibitory promiscuity - 0.9805 98.05%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.5147 51.47%
Eye corrosion - 0.9833 98.33%
Eye irritation - 0.9392 93.92%
Skin irritation - 0.7792 77.92%
Skin corrosion - 0.9371 93.71%
Ames mutagenesis + 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8629 86.29%
Micronuclear + 0.5600 56.00%
Hepatotoxicity - 0.8750 87.50%
skin sensitisation - 0.8467 84.67%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.8909 89.09%
Acute Oral Toxicity (c) III 0.6832 68.32%
Estrogen receptor binding + 0.7620 76.20%
Androgen receptor binding + 0.7379 73.79%
Thyroid receptor binding + 0.6828 68.28%
Glucocorticoid receptor binding + 0.8772 87.72%
Aromatase binding + 0.6872 68.72%
PPAR gamma - 0.4840 48.40%
Honey bee toxicity - 0.7406 74.06%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.7764 77.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.50% 96.09%
CHEMBL261 P00915 Carbonic anhydrase I 98.20% 96.76%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 97.41% 93.40%
CHEMBL217 P14416 Dopamine D2 receptor 95.94% 95.62%
CHEMBL3192 Q9BY41 Histone deacetylase 8 95.58% 93.99%
CHEMBL2056 P21728 Dopamine D1 receptor 95.56% 91.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.28% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.51% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.38% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.53% 94.45%
CHEMBL2535 P11166 Glucose transporter 90.04% 98.75%
CHEMBL2581 P07339 Cathepsin D 90.01% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.62% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.49% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.05% 99.17%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.26% 94.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 86.17% 91.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.95% 95.89%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 85.16% 100.00%
CHEMBL5311 P37023 Serine/threonine-protein kinase receptor R3 84.39% 82.67%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 83.33% 91.79%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 82.95% 82.38%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.69% 90.71%
CHEMBL6175 Q9H3R0 Lysine-specific demethylase 4C 81.51% 96.69%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.51% 89.62%
CHEMBL4208 P20618 Proteasome component C5 81.16% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.47% 86.33%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 80.27% 95.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Berberis brandisiana

Cross-Links

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PubChem 102153975
LOTUS LTS0179021
wikiData Q105268479