Nostophycin B

Details

Top
Internal ID 43df4c78-a948-4b37-ab50-0d19b2390516
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name 3-[(6R,9R,18S,25R)-6-benzyl-21-hydroxy-22-(2-hydroxy-5-phenylpentyl)-2,5,8,14,17,20,24-heptaoxo-3-propan-2-yl-1,4,7,13,16,19,23-heptazatricyclo[23.3.0.09,13]octacosan-18-yl]propanamide
SMILES (Canonical) CC(C)C1C(=O)N2CCCC2C(=O)NC(C(C(=O)NC(C(=O)NCC(=O)N3CCCC3C(=O)NC(C(=O)N1)CC4=CC=CC=C4)CCC(=O)N)O)CC(CCCC5=CC=CC=C5)O
SMILES (Isomeric) CC(C)C1C(=O)N2CCC[C@@H]2C(=O)NC(C(C(=O)N[C@H](C(=O)NCC(=O)N3CCC[C@@H]3C(=O)N[C@@H](C(=O)N1)CC4=CC=CC=C4)CCC(=O)N)O)CC(CCCC5=CC=CC=C5)O
InChI InChI=1S/C45H62N8O10/c1-27(2)38-45(63)53-23-11-19-35(53)43(61)49-32(25-30(54)17-9-16-28-12-5-3-6-13-28)39(57)44(62)48-31(20-21-36(46)55)40(58)47-26-37(56)52-22-10-18-34(52)42(60)50-33(41(59)51-38)24-29-14-7-4-8-15-29/h3-8,12-15,27,30-35,38-39,54,57H,9-11,16-26H2,1-2H3,(H2,46,55)(H,47,58)(H,48,62)(H,49,61)(H,50,60)(H,51,59)/t30?,31-,32?,33+,34+,35+,38?,39?/m0/s1
InChI Key PLGIVKLVRGIMTH-URPROHAVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C45H62N8O10
Molecular Weight 875.00 g/mol
Exact Mass 874.45889020 g/mol
Topological Polar Surface Area (TPSA) 270.00 Ų
XlogP 1.30
Atomic LogP (AlogP) -0.66
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 12

Synonyms

Top
3-[(6R,9R,18S,25R)-6-benzyl-21-hydroxy-22-(2-hydroxy-5-phenylpentyl)-2,5,8,14,17,20,24-heptaoxo-3-propan-2-yl-1,4,7,13,16,19,23-heptazatricyclo[23.3.0.09,13]octacosan-18-yl]propanamide
3-((6R,9R,18S,25R)-6-benzyl-21-hydroxy-22-(2-hydroxy-5-phenylpentyl)-2,5,8,14,17,20,24-heptaoxo-3-propan-2-yl-1,4,7,13,16,19,23-heptazatricyclo(23.3.0.09,13)octacosan-18-yl)propanamide
3-((6R,9R,18S,25R)-6-Benzyl-5,8,17,20,21,24-hexahydroxy-22-(2-hydroxy-5-phenylpentyl)-2,14-dioxo-3-(propan-2-yl)-1,4,7,13,16,19,23-heptaazatricyclo(23.3.0.0,)octacosa-4,7,16,19,23-pentaen-18-yl)propanimidate
3-((9S,15aR,24R,26aR)-24-benzyl-12-hydroxy-13-(2-hydroxy-5-phenylpentyl)-21-isopropyl-5,8,11,15,20,23,26-heptaoxotetracosahydro-1H,5H-dipyrrolo(2,1-c:2',1'-l)(1,4,7,10,13,16,19)heptaazacyclodocosin-9-yl)propanamide
3-((9S,15aR,24R,26aR)-24-benzyl-12-hydroxy-13-(2-hydroxy-5-phenylpentyl)-21-isopropyl-5,8,11,15,20,23,26-heptaoxotetracosahydro-1H,5H-dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13,16,19]heptaazacyclodocosin-9-yl)propanamide
3-[(6R,9R,18S,25R)-6-Benzyl-5,8,17,20,21,24-hexahydroxy-22-(2-hydroxy-5-phenylpentyl)-2,14-dioxo-3-(propan-2-yl)-1,4,7,13,16,19,23-heptaazatricyclo[23.3.0.0,]octacosa-4,7,16,19,23-pentaen-18-yl]propanimidate
RefChem:166779
CHEBI:213438
DTXSID801047520

2D Structure

Top
2D Structure of Nostophycin B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6261 62.61%
Caco-2 - 0.8751 87.51%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5623 56.23%
OATP2B1 inhibitior - 0.5743 57.43%
OATP1B1 inhibitior + 0.8607 86.07%
OATP1B3 inhibitior + 0.9432 94.32%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7399 73.99%
P-glycoprotein inhibitior + 0.7414 74.14%
P-glycoprotein substrate + 0.8872 88.72%
CYP3A4 substrate + 0.7136 71.36%
CYP2C9 substrate - 0.7891 78.91%
CYP2D6 substrate - 0.7806 78.06%
CYP3A4 inhibition - 0.9145 91.45%
CYP2C9 inhibition - 0.8766 87.66%
CYP2C19 inhibition - 0.8415 84.15%
CYP2D6 inhibition - 0.9318 93.18%
CYP1A2 inhibition - 0.9661 96.61%
CYP2C8 inhibition + 0.5973 59.73%
CYP inhibitory promiscuity - 0.9448 94.48%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.6539 65.39%
Eye corrosion - 0.9916 99.16%
Eye irritation - 0.9106 91.06%
Skin irritation - 0.7837 78.37%
Skin corrosion - 0.9333 93.33%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3753 37.53%
Micronuclear + 0.8800 88.00%
Hepatotoxicity - 0.5431 54.31%
skin sensitisation - 0.8943 89.43%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.8545 85.45%
Acute Oral Toxicity (c) III 0.6257 62.57%
Estrogen receptor binding + 0.7937 79.37%
Androgen receptor binding + 0.7025 70.25%
Thyroid receptor binding + 0.5669 56.69%
Glucocorticoid receptor binding + 0.5461 54.61%
Aromatase binding + 0.5693 56.93%
PPAR gamma + 0.7642 76.42%
Honey bee toxicity - 0.7873 78.73%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.4613 46.13%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.86% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.73% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.98% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.78% 94.45%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 94.94% 97.64%
CHEMBL1902 P62942 FK506-binding protein 1A 94.67% 97.05%
CHEMBL5608 Q16288 NT-3 growth factor receptor 94.14% 95.89%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.40% 91.11%
CHEMBL221 P23219 Cyclooxygenase-1 92.78% 90.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.69% 95.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.68% 90.71%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.32% 97.25%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 91.29% 93.00%
CHEMBL4071 P08311 Cathepsin G 90.52% 94.64%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 90.07% 95.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.83% 90.08%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.48% 97.09%
CHEMBL4588 P22894 Matrix metalloproteinase 8 88.61% 94.66%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.83% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 87.39% 96.47%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 87.36% 82.38%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 87.14% 93.03%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.75% 82.69%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.88% 100.00%
CHEMBL333 P08253 Matrix metalloproteinase-2 85.33% 96.31%
CHEMBL5203 P33316 dUTP pyrophosphatase 85.22% 99.18%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.79% 86.33%
CHEMBL4394 Q9NYA1 Sphingosine kinase 1 84.76% 96.03%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 83.71% 98.33%
CHEMBL4447 Q9Y337 Kallikrein 5 80.77% 87.50%
CHEMBL4616 Q92847 Ghrelin receptor 80.06% 92.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 146683735
LOTUS LTS0041989
wikiData Q105210899