Herbicidin H

Details

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Internal ID 1f3ced6a-2f1c-4405-b19b-df880bb628f5
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name (1R,3S,4R,5R,7R,9R,11S,12S,13S)-5-(6-aminopurin-9-yl)-1,12-dihydroxy-13-[(E)-2-(hydroxymethyl)but-2-enoyl]oxy-4-methoxy-2,6,10-trioxatricyclo[7.4.0.03,7]tridecane-11-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H27N5O11/c1-3-8(5-28)21(32)37-16-12(29)14(20(30)31)36-10-4-9-13(38-22(10,16)33)15(34-2)19(35-9)27-7-26-11-17(23)24-6-25-18(11)27/h3,6-7,9-10,12-16,19,28-29,33H,4-5H2,1-2H3,(H,30,31)(H2,23,24,25)/b8-3+/t9-,10-,12-,13+,14+,15-,16+,19-,22-/m1/s1
InChI Key UYMJQKGQRMSHEJ-LRPIPPEASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C22H27N5O11
Molecular Weight 537.50 g/mol
Exact Mass 537.17070669 g/mol
Topological Polar Surface Area (TPSA) 231.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.14
H-Bond Acceptor 15
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Herbicidin H

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8610 86.10%
Caco-2 - 0.8602 86.02%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Nucleus 0.3036 30.36%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9032 90.32%
OATP1B3 inhibitior + 0.9375 93.75%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.6017 60.17%
P-glycoprotein inhibitior - 0.4643 46.43%
P-glycoprotein substrate + 0.6362 63.62%
CYP3A4 substrate + 0.6496 64.96%
CYP2C9 substrate - 0.8041 80.41%
CYP2D6 substrate - 0.8811 88.11%
CYP3A4 inhibition - 0.9046 90.46%
CYP2C9 inhibition - 0.7899 78.99%
CYP2C19 inhibition - 0.8132 81.32%
CYP2D6 inhibition - 0.8949 89.49%
CYP1A2 inhibition - 0.8375 83.75%
CYP2C8 inhibition + 0.5789 57.89%
CYP inhibitory promiscuity - 0.8549 85.49%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5426 54.26%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.9453 94.53%
Skin irritation - 0.7762 77.62%
Skin corrosion - 0.9333 93.33%
Ames mutagenesis - 0.5110 51.10%
Human Ether-a-go-go-Related Gene inhibition - 0.6024 60.24%
Micronuclear + 0.9900 99.00%
Hepatotoxicity - 0.5681 56.81%
skin sensitisation - 0.8592 85.92%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.8702 87.02%
Acute Oral Toxicity (c) III 0.6282 62.82%
Estrogen receptor binding + 0.7972 79.72%
Androgen receptor binding + 0.5854 58.54%
Thyroid receptor binding + 0.6553 65.53%
Glucocorticoid receptor binding + 0.6734 67.34%
Aromatase binding + 0.6810 68.10%
PPAR gamma + 0.6176 61.76%
Honey bee toxicity - 0.7753 77.53%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.8000 80.00%
Fish aquatic toxicity + 0.7150 71.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.26% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.03% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.79% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.78% 97.09%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 91.12% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.80% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.37% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.28% 94.00%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 89.83% 95.48%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.57% 94.45%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.56% 97.36%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.91% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.14% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.59% 95.56%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 85.34% 94.08%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 84.77% 82.50%
CHEMBL221 P23219 Cyclooxygenase-1 84.60% 90.17%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 83.97% 93.00%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 81.92% 88.00%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 81.76% 94.97%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 81.51% 94.62%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.00% 92.62%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 80.96% 89.34%
CHEMBL4040 P28482 MAP kinase ERK2 80.36% 83.82%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139583628
LOTUS LTS0199677
wikiData Q75064752