Gibberellin A3 methyl ester

Details

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Internal ID 76dc24d8-b312-451e-947a-c18f9b270d2f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Diterpene lactones
IUPAC Name methyl (1R,2R,5S,8S,9S,10R,11S,12S)-5,12-dihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadec-13-ene-9-carboxylate
SMILES (Canonical) CC12C(C=CC3(C1C(C45C3CCC(C4)(C(=C)C5)O)C(=O)OC)OC2=O)O
SMILES (Isomeric) C[C@@]12[C@H](C=C[C@@]3([C@@H]1[C@@H]([C@]45[C@H]3CC[C@](C4)(C(=C)C5)O)C(=O)OC)OC2=O)O
InChI InChI=1S/C20H24O6/c1-10-8-18-9-19(10,24)6-4-11(18)20-7-5-12(21)17(2,16(23)26-20)14(20)13(18)15(22)25-3/h5,7,11-14,21,24H,1,4,6,8-9H2,2-3H3/t11-,12+,13-,14-,17-,18+,19+,20-/m1/s1
InChI Key DCYKYFYDBJFJHO-QDEMZEMRSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C20H24O6
Molecular Weight 360.40 g/mol
Exact Mass 360.15728848 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 0.60
Atomic LogP (AlogP) 1.12
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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GA3 Methyl ester
510-50-9
O-methyl gibberellin A3
methyl (1R,2R,5S,8S,9S,10R,11S,12S)-5,12-dihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadec-13-ene-9-carboxylate
methyl (1S,2S,4aR,4bR,7S,9aS,10S,10aR)-2,7-dihydroxy-1-methyl-8-methylene-13-oxo-1,2,4b,5,6,7,8,9,10,10a-decahydro-4a,1-(epoxymethano)-7,9a-methanobenzo[a]azulene-10-carboxylate
methyl 2beta,7alpha-dihydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibb-3-ene-10beta-carboxylate
CHEMBL4754522
CHEBI:73253
Q27140402

2D Structure

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2D Structure of Gibberellin A3 methyl ester

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9744 97.44%
Caco-2 - 0.5218 52.18%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability + 0.6286 62.86%
Subcellular localzation Mitochondria 0.7859 78.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9209 92.09%
OATP1B3 inhibitior + 0.9273 92.73%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7442 74.42%
BSEP inhibitior - 0.9430 94.30%
P-glycoprotein inhibitior - 0.8046 80.46%
P-glycoprotein substrate - 0.6320 63.20%
CYP3A4 substrate + 0.6714 67.14%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8689 86.89%
CYP3A4 inhibition - 0.7142 71.42%
CYP2C9 inhibition - 0.8586 85.86%
CYP2C19 inhibition - 0.8514 85.14%
CYP2D6 inhibition - 0.9256 92.56%
CYP1A2 inhibition - 0.8336 83.36%
CYP2C8 inhibition - 0.6071 60.71%
CYP inhibitory promiscuity - 0.9013 90.13%
UGT catelyzed - 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5235 52.35%
Eye corrosion - 0.9825 98.25%
Eye irritation - 0.9557 95.57%
Skin irritation - 0.6650 66.50%
Skin corrosion - 0.9190 91.90%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7329 73.29%
Micronuclear - 0.6900 69.00%
Hepatotoxicity + 0.5283 52.83%
skin sensitisation - 0.7957 79.57%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.7790 77.90%
Acute Oral Toxicity (c) IV 0.4644 46.44%
Estrogen receptor binding + 0.7406 74.06%
Androgen receptor binding - 0.7739 77.39%
Thyroid receptor binding + 0.6727 67.27%
Glucocorticoid receptor binding + 0.7467 74.67%
Aromatase binding + 0.5861 58.61%
PPAR gamma - 0.5994 59.94%
Honey bee toxicity - 0.9012 90.12%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.9768 97.68%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.28% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.02% 94.45%
CHEMBL2581 P07339 Cathepsin D 94.28% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.98% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.35% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.24% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.58% 99.23%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.12% 92.62%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.92% 91.07%
CHEMBL221 P23219 Cyclooxygenase-1 84.26% 90.17%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.19% 93.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.94% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.21% 97.14%
CHEMBL340 P08684 Cytochrome P450 3A4 83.08% 91.19%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.03% 95.50%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.06% 97.28%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.79% 89.00%
CHEMBL4208 P20618 Proteasome component C5 80.72% 90.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.59% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 10926485
LOTUS LTS0199024
wikiData Q27140402