5-[(1R,3S,5S,8R,9S,10S,13R,14S,17R)-1,3,5,14-tetrahydroxy-10,13-dimethyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]pyran-2-one

Details

Top
Internal ID 69e8fc06-44a1-425e-8852-09ac2f4001dd
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Bufanolides and derivatives
IUPAC Name 5-[(1R,3S,5S,8R,9S,10S,13R,14S,17R)-1,3,5,14-tetrahydroxy-10,13-dimethyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]pyran-2-one
SMILES (Canonical) CC12CCC3C(C1(CCC2C4=COC(=O)C=C4)O)CCC5(C3(C(CC(C5)O)O)C)O
SMILES (Isomeric) C[C@]12CC[C@H]3[C@H]([C@]1(CC[C@@H]2C4=COC(=O)C=C4)O)CC[C@]5([C@@]3([C@@H](C[C@@H](C5)O)O)C)O
InChI InChI=1S/C24H34O6/c1-21-8-5-17-18(6-9-23(28)12-15(25)11-19(26)22(17,23)2)24(21,29)10-7-16(21)14-3-4-20(27)30-13-14/h3-4,13,15-19,25-26,28-29H,5-12H2,1-2H3/t15-,16+,17-,18+,19+,21+,22-,23-,24-/m0/s1
InChI Key XJQLUUYKMFPVPJ-ZYBWNTRQSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C24H34O6
Molecular Weight 418.50 g/mol
Exact Mass 418.23553880 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 1.50
Atomic LogP (AlogP) 2.33
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 1

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 5-[(1R,3S,5S,8R,9S,10S,13R,14S,17R)-1,3,5,14-tetrahydroxy-10,13-dimethyl-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]pyran-2-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9677 96.77%
Caco-2 - 0.7264 72.64%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.7273 72.73%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8822 88.22%
OATP1B3 inhibitior + 0.9065 90.65%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8858 88.58%
BSEP inhibitior + 0.5550 55.50%
P-glycoprotein inhibitior - 0.7802 78.02%
P-glycoprotein substrate - 0.7183 71.83%
CYP3A4 substrate + 0.6833 68.33%
CYP2C9 substrate - 0.7957 79.57%
CYP2D6 substrate - 0.8281 82.81%
CYP3A4 inhibition + 0.5126 51.26%
CYP2C9 inhibition - 0.8857 88.57%
CYP2C19 inhibition - 0.9088 90.88%
CYP2D6 inhibition - 0.9440 94.40%
CYP1A2 inhibition - 0.6944 69.44%
CYP2C8 inhibition - 0.6807 68.07%
CYP inhibitory promiscuity - 0.9247 92.47%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6124 61.24%
Eye corrosion - 0.9939 99.39%
Eye irritation - 0.9680 96.80%
Skin irritation - 0.5695 56.95%
Skin corrosion - 0.9043 90.43%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3660 36.60%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.5426 54.26%
skin sensitisation - 0.8999 89.99%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.8277 82.77%
Acute Oral Toxicity (c) I 0.5473 54.73%
Estrogen receptor binding + 0.8881 88.81%
Androgen receptor binding + 0.7686 76.86%
Thyroid receptor binding + 0.5790 57.90%
Glucocorticoid receptor binding + 0.7070 70.70%
Aromatase binding + 0.7199 71.99%
PPAR gamma + 0.6133 61.33%
Honey bee toxicity - 0.8377 83.77%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 0.9822 98.22%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 96.01% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.55% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.13% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.86% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.78% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.66% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.01% 95.89%
CHEMBL4208 P20618 Proteasome component C5 86.90% 90.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.77% 82.69%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.71% 89.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.15% 93.04%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.63% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.35% 85.14%
CHEMBL3192 Q9BY41 Histone deacetylase 8 80.92% 93.99%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 162968115
LOTUS LTS0102451
wikiData Q105329143