[(2R,3R,4S,5R)-3-[(2S,3R,4S,5R)-4,5-dihydroxy-3-methoxy-tetrahydropyran-2-yl]oxy-5-hydroxy-2-[(6R)-2-methyl-3-methylene-6-[(3S,4R,5S,6S,8S,9R,10S,13R,14S,15R,17R)-3,4,6,8,15-pentahydroxy-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]heptoxy]tetrahydropyran-4-yl] hydrogen sulfate

Details

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Internal ID f876ae9b-a67d-405c-b00e-4fe4016c53e7
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(2R,3R,4S,5R)-3-[(2S,3R,4S,5R)-4,5-dihydroxy-3-methoxyoxan-2-yl]oxy-5-hydroxy-2-[(6R)-2-methyl-3-methylidene-6-[(3S,4R,5S,6S,8S,9R,10S,13R,14S,15R,17R)-3,4,6,8,15-pentahydroxy-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]heptoxy]oxan-4-yl] hydrogen sulfate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C39H66O17S/c1-18(20(3)15-52-35-33(31(26(44)17-53-35)56-57(48,49)50)55-36-32(51-6)30(46)25(43)16-54-36)7-8-19(2)21-13-23(41)34-37(21,4)12-10-27-38(5)11-9-22(40)29(45)28(38)24(42)14-39(27,34)47/h19-36,40-47H,1,7-17H2,2-6H3,(H,48,49,50)/t19-,20?,21-,22+,23-,24+,25-,26-,27-,28+,29+,30+,31+,32-,33-,34-,35-,36+,37-,38-,39+/m1/s1
InChI Key ZADHQGHCYVGCBA-DRVGXLBBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C39H66O17S
Molecular Weight 839.00 g/mol
Exact Mass 838.40207181 g/mol
Topological Polar Surface Area (TPSA) 280.00 Ų
XlogP 0.40
Atomic LogP (AlogP) 0.04
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 13

Synonyms

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CHEMBL1208010
.beta.-D-Xylopyranoside, (3.beta.,4.beta.,5 .alpha.,6 .alpha.,15.beta.)-3,4,6,8,15-pentahydroxyergost-24(28)-en-26-yl 2-O-(2-O-methyl-.beta.-D-xylopyranosyl)-, 3-(sodium sulfate)
[(2R,3R,4S,5R)-3-[(2S,3R,4S,5R)-4,5-dihydroxy-3-methoxy-tetrahydropyran-2-yl]oxy-5-hydroxy-2-[(6R)-2-methyl-3-methylene-6-[(3S,4R,5S,6S,8S,9R,10S,13R,14S,15R,17R)-3,4,6,8,15-pentahydroxy-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]heptoxy]tetrahydropyran-4-yl] hydrogen sulfate

2D Structure

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2D Structure of [(2R,3R,4S,5R)-3-[(2S,3R,4S,5R)-4,5-dihydroxy-3-methoxy-tetrahydropyran-2-yl]oxy-5-hydroxy-2-[(6R)-2-methyl-3-methylene-6-[(3S,4R,5S,6S,8S,9R,10S,13R,14S,15R,17R)-3,4,6,8,15-pentahydroxy-10,13-dimethyl-1,2,3,4,5,6,7,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]heptoxy]tetrahydropyran-4-yl] hydrogen sulfate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7630 76.30%
Caco-2 - 0.8788 87.88%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4065 40.65%
OATP2B1 inhibitior - 0.8689 86.89%
OATP1B1 inhibitior + 0.8426 84.26%
OATP1B3 inhibitior + 0.9301 93.01%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8271 82.71%
BSEP inhibitior + 0.9311 93.11%
P-glycoprotein inhibitior + 0.7359 73.59%
P-glycoprotein substrate + 0.7231 72.31%
CYP3A4 substrate + 0.7496 74.96%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8603 86.03%
CYP3A4 inhibition - 0.8868 88.68%
CYP2C9 inhibition - 0.7565 75.65%
CYP2C19 inhibition - 0.7102 71.02%
CYP2D6 inhibition - 0.8715 87.15%
CYP1A2 inhibition - 0.7417 74.17%
CYP2C8 inhibition + 0.6475 64.75%
CYP inhibitory promiscuity - 0.9109 91.09%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.5900 59.00%
Carcinogenicity (trinary) Non-required 0.5877 58.77%
Eye corrosion - 0.9787 97.87%
Eye irritation - 0.9099 90.99%
Skin irritation - 0.7582 75.82%
Skin corrosion - 0.9159 91.59%
Ames mutagenesis - 0.6378 63.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7798 77.98%
Micronuclear + 0.5600 56.00%
Hepatotoxicity - 0.6226 62.26%
skin sensitisation - 0.8481 84.81%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.8961 89.61%
Acute Oral Toxicity (c) III 0.5600 56.00%
Estrogen receptor binding + 0.8138 81.38%
Androgen receptor binding + 0.7313 73.13%
Thyroid receptor binding - 0.5639 56.39%
Glucocorticoid receptor binding + 0.6430 64.30%
Aromatase binding + 0.6301 63.01%
PPAR gamma + 0.7512 75.12%
Honey bee toxicity - 0.5903 59.03%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5545 55.45%
Fish aquatic toxicity + 0.9866 98.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.91% 83.82%
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.73% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.12% 96.09%
CHEMBL2179 P04062 Beta-glucocerebrosidase 96.23% 85.31%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.28% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.41% 91.11%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 93.87% 96.77%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 93.70% 97.14%
CHEMBL226 P30542 Adenosine A1 receptor 93.00% 95.93%
CHEMBL2581 P07339 Cathepsin D 92.78% 98.95%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 92.72% 82.69%
CHEMBL233 P35372 Mu opioid receptor 92.07% 97.93%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.81% 95.89%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.38% 96.61%
CHEMBL1744525 P43490 Nicotinamide phosphoribosyltransferase 91.32% 96.25%
CHEMBL4302 P08183 P-glycoprotein 1 91.13% 92.98%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.10% 97.09%
CHEMBL2815 P04629 Nerve growth factor receptor Trk-A 90.98% 87.16%
CHEMBL340 P08684 Cytochrome P450 3A4 90.15% 91.19%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.06% 100.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.63% 96.47%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 88.31% 95.71%
CHEMBL4581 P52732 Kinesin-like protein 1 87.98% 93.18%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 87.93% 96.38%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 87.20% 92.88%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 86.92% 92.78%
CHEMBL5203 P33316 dUTP pyrophosphatase 86.59% 99.18%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 86.34% 91.03%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.08% 94.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.67% 91.24%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.06% 96.90%
CHEMBL5255 O00206 Toll-like receptor 4 85.05% 92.50%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 85.04% 91.83%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.92% 95.89%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 83.92% 94.97%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.40% 97.28%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.40% 98.75%
CHEMBL1871 P10275 Androgen Receptor 82.86% 96.43%
CHEMBL4835 P00338 L-lactate dehydrogenase A chain 82.59% 95.34%
CHEMBL237 P41145 Kappa opioid receptor 82.52% 98.10%
CHEMBL5600 P27448 Serine/threonine-protein kinase c-TAK1 82.51% 88.81%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.47% 93.03%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.46% 95.58%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.31% 100.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.26% 100.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.93% 95.83%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 81.79% 89.05%
CHEMBL204 P00734 Thrombin 81.78% 96.01%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.43% 92.86%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 81.38% 95.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 81.37% 98.05%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.17% 96.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.87% 95.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.54% 89.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.51% 97.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 80.44% 100.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.24% 90.71%
CHEMBL301 P24941 Cyclin-dependent kinase 2 80.14% 91.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 505371
LOTUS LTS0153235
wikiData Q105369807