Berkeleydione

Details

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Internal ID 90541d92-4eb6-4edd-9ecb-1c8bf0135760
Taxonomy Organoheterocyclic compounds > Lactones > Delta valerolactones
IUPAC Name methyl (1R,2S,12S,14R,16S)-16-hydroxy-2,6,6,11,14,16-hexamethyl-18-methylidene-8,15,17-trioxo-7-oxatetracyclo[12.3.1.02,12.05,10]octadeca-4,10-diene-1-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H32O7/c1-13-15-11-18(27)33-22(3,4)16(15)9-10-24(6)17(13)12-23(5)14(2)26(24,21(30)32-8)20(29)25(7,31)19(23)28/h9,17,31H,2,10-12H2,1,3-8H3/t17-,23+,24-,25-,26-/m0/s1
InChI Key RBGYOLFHIDJTOX-VMXKAMJHSA-N
Popularity 9 references in papers

Physical and Chemical Properties

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Molecular Formula C26H32O7
Molecular Weight 456.50 g/mol
Exact Mass 456.21480336 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 1.50
Atomic LogP (AlogP) 3.01
H-Bond Acceptor 7
H-Bond Donor 1
Rotatable Bonds 1

Synonyms

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CHEBI:69021
CHEMBL400514
SCHEMBL23361061
DTXSID001045475
BDBM50355787
Q15410301
(5aS,7R,9S,11R,11aS)-Methyl 9-hydroxy-1,1,5,7,9,11a-hexamethyl-14-methylidene-3,8,10-trioxo-1,3,4,5a,6,7,8,9,10,11,11a,12-dodecahydro-7,11-methanocycloocta[4,5]cyclohepta[1,2-c]pyran-11-carboxylate
methyl (1R,2S,12S,14R,16S)-16-hydroxy-2,6,6,11,14,16-hexamethyl-18-methylidene-8,15,17-trioxo-7-oxatetracyclo[12.3.1.02,12.05,10]octadeca-4,10-diene-1-carboxylate
methyl (5aS,7R,9S,11R,11aS)-9-hydroxy-1,1,5,7,9,11a-hexamethyl-14-methylidene-3,8,10-trioxo-3,4,5a,6,7,8,9,10,11a,12-decahydro-7,11-methanocycloocta[4,5]cyclohepta[1,2-c]pyran-11(1H)-carboxylate

2D Structure

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2D Structure of Berkeleydione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9692 96.92%
Caco-2 - 0.5441 54.41%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7126 71.26%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8644 86.44%
OATP1B3 inhibitior + 0.8716 87.16%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.7140 71.40%
P-glycoprotein inhibitior - 0.5109 51.09%
P-glycoprotein substrate + 0.5612 56.12%
CYP3A4 substrate + 0.6694 66.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8898 88.98%
CYP3A4 inhibition + 0.5557 55.57%
CYP2C9 inhibition - 0.8551 85.51%
CYP2C19 inhibition - 0.7961 79.61%
CYP2D6 inhibition - 0.9415 94.15%
CYP1A2 inhibition - 0.7078 70.78%
CYP2C8 inhibition + 0.5671 56.71%
CYP inhibitory promiscuity - 0.9454 94.54%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6423 64.23%
Eye corrosion - 0.9879 98.79%
Eye irritation - 0.8606 86.06%
Skin irritation - 0.5981 59.81%
Skin corrosion - 0.9403 94.03%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4680 46.80%
Micronuclear - 0.6000 60.00%
Hepatotoxicity - 0.5001 50.01%
skin sensitisation - 0.7603 76.03%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.6721 67.21%
Acute Oral Toxicity (c) III 0.4761 47.61%
Estrogen receptor binding + 0.5937 59.37%
Androgen receptor binding + 0.6353 63.53%
Thyroid receptor binding + 0.6908 69.08%
Glucocorticoid receptor binding + 0.6803 68.03%
Aromatase binding + 0.7325 73.25%
PPAR gamma + 0.6078 60.78%
Honey bee toxicity - 0.7226 72.26%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9938 99.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.24% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.66% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.02% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 91.33% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.49% 95.56%
CHEMBL4208 P20618 Proteasome component C5 88.29% 90.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.47% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.02% 94.45%
CHEMBL2996 Q05655 Protein kinase C delta 84.87% 97.79%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.01% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.40% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.01% 97.14%
CHEMBL340 P08684 Cytochrome P450 3A4 81.02% 91.19%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.20% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.16% 99.23%
CHEMBL3922 P50579 Methionine aminopeptidase 2 80.10% 97.28%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 21580417
LOTUS LTS0224954
wikiData Q15410301