Antibiotic A-40926 A1

Details

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Internal ID b05a739e-c9d1-40f6-9329-358e1f93b885
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Oligopeptides
IUPAC Name (1S,2R,19R,22R,34S,37R,40R,52S)-64-[(2S,3R,4R,5S,6S)-6-carboxy-4,5-dihydroxy-3-(undecanoylamino)oxan-2-yl]oxy-5,32-dichloro-2,26,31,44,49-pentahydroxy-22-(methylamino)-21,35,38,54,56,59-hexaoxo-47-[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7,13,28-trioxa-20,36,39,53,55,58-hexazaundecacyclo[38.14.2.23,6.214,17.219,34.18,12.123,27.129,33.141,45.010,37.046,51]hexahexaconta-3,5,8,10,12(64),14(63),15,17(62),23(61),24,26,29(60),30,32,41(57),42,44,46(51),47,49,65-henicosaene-52-carboxylic acid
SMILES (Canonical) CCCCCCCCCCC(=O)NC1C(C(C(OC1OC2=C3C=C4C=C2OC5=C(C=C(C=C5)C(C6C(=O)NC(C7=C(C(=CC(=C7)O)OC8C(C(C(C(O8)CO)O)O)O)C9=C(C=CC(=C9)C(C(=O)N6)NC(=O)C4NC(=O)C1C2=C(C(=CC(=C2)OC2=C(C=CC(=C2)C(C(=O)NC(CC2=CC=C(O3)C=C2)C(=O)N1)NC)O)O)Cl)O)C(=O)O)O)Cl)C(=O)O)O)O
SMILES (Isomeric) CCCCCCCCCCC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC2=C3C=C4C=C2OC5=C(C=C(C=C5)[C@H]([C@H]6C(=O)N[C@@H](C7=C(C(=CC(=C7)O)O[C@@H]8[C@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)C9=C(C=CC(=C9)[C@H](C(=O)N6)NC(=O)[C@@H]4NC(=O)[C@@H]1C2=C(C(=CC(=C2)OC2=C(C=CC(=C2)[C@H](C(=O)N[C@H](CC2=CC=C(O3)C=C2)C(=O)N1)NC)O)O)Cl)O)C(=O)O)O)Cl)C(=O)O)O)O
InChI InChI=1S/C82H86Cl2N8O29/c1-3-4-5-6-7-8-9-10-11-55(98)87-64-67(101)69(103)72(80(113)114)121-81(64)120-71-52-26-37-27-53(71)117-49-21-16-36(24-44(49)83)65(99)63-78(110)91-62(79(111)112)42-28-38(94)29-51(118-82-70(104)68(102)66(100)54(32-93)119-82)56(42)41-23-34(14-19-46(41)95)59(75(107)92-63)88-76(108)60(37)89-77(109)61-43-30-40(31-48(97)57(43)84)116-50-25-35(15-20-47(50)96)58(85-2)74(106)86-45(73(105)90-61)22-33-12-17-39(115-52)18-13-33/h12-21,23-31,45,54,58-70,72,81-82,85,93-97,99-104H,3-11,22,32H2,1-2H3,(H,86,106)(H,87,98)(H,88,108)(H,89,109)(H,90,105)(H,91,110)(H,92,107)(H,111,112)(H,113,114)/t45-,54-,58-,59-,60-,61+,62+,63+,64-,65-,66-,67-,68+,69+,70+,72+,81-,82+/m1/s1
InChI Key KFFFTRROFFANLL-PKPPEPSOSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C82H86Cl2N8O29
Molecular Weight 1718.50 g/mol
Exact Mass 1716.4877741 g/mol
Topological Polar Surface Area (TPSA) 578.00 Ų
XlogP 3.40
Atomic LogP (AlogP) 3.94
H-Bond Acceptor 28
H-Bond Donor 21
Rotatable Bonds 18

Synonyms

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Antibiotic A-40926 A1
4E60GZ933I
110882-83-2
UNII-4E60GZ933I
Ristomycin A aglycone, 5,31-dichloro-7-demethyl-64-O-demethyl-19-deoxy-56-O-(2-deoxy-2-((1-oxoundecyl)amino)-beta-D-glucopyranuronosyl)-42-o-alpha-D-mannopyranosyl-N15-methyl-
A-40926 A
Q27259473
RISTOMYCIN A AGLYCONE, 5,31-DICHLORO-7-DEMETHYL-64-O-DEMETHYL-19-DEOXY-56-O-(2-DEOXY-2-((1-OXOUNDECYL)AMINO)-.BETA.-D-GLUCOPYRANURONOSYL)-42-O-.ALPHA.-D-MANNOPYRANOSYL-N15-METHYL-

2D Structure

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2D Structure of Antibiotic A-40926 A1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7308 73.08%
Caco-2 - 0.8584 85.84%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Nucleus 0.4634 46.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8100 81.00%
OATP1B3 inhibitior + 0.9144 91.44%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9686 96.86%
P-glycoprotein inhibitior + 0.7419 74.19%
P-glycoprotein substrate + 0.8243 82.43%
CYP3A4 substrate + 0.7580 75.80%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8388 83.88%
CYP3A4 inhibition - 0.6355 63.55%
CYP2C9 inhibition - 0.8471 84.71%
CYP2C19 inhibition - 0.7669 76.69%
CYP2D6 inhibition - 0.8442 84.42%
CYP1A2 inhibition - 0.8160 81.60%
CYP2C8 inhibition + 0.8843 88.43%
CYP inhibitory promiscuity - 0.7294 72.94%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.7300 73.00%
Carcinogenicity (trinary) Non-required 0.5753 57.53%
Eye corrosion - 0.9866 98.66%
Eye irritation - 0.8956 89.56%
Skin irritation - 0.7678 76.78%
Skin corrosion - 0.9350 93.50%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7610 76.10%
Micronuclear + 0.8100 81.00%
Hepatotoxicity + 0.5376 53.76%
skin sensitisation - 0.8535 85.35%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity + 0.6810 68.10%
Acute Oral Toxicity (c) III 0.6434 64.34%
Estrogen receptor binding + 0.5821 58.21%
Androgen receptor binding + 0.7529 75.29%
Thyroid receptor binding + 0.8016 80.16%
Glucocorticoid receptor binding + 0.7896 78.96%
Aromatase binding + 0.7256 72.56%
PPAR gamma + 0.7891 78.91%
Honey bee toxicity - 0.6259 62.59%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5894 58.94%
Fish aquatic toxicity + 0.9502 95.02%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL220 P22303 Acetylcholinesterase 99.90% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.90% 91.11%
CHEMBL2581 P07339 Cathepsin D 99.88% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 99.34% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.08% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.06% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.58% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 94.52% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.71% 97.09%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 93.71% 85.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.36% 95.56%
CHEMBL3359 P21462 Formyl peptide receptor 1 90.73% 93.56%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.52% 96.21%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 90.15% 92.08%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.90% 86.33%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 89.73% 96.95%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 88.67% 89.62%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 87.76% 92.29%
CHEMBL5255 O00206 Toll-like receptor 4 87.53% 92.50%
CHEMBL2535 P11166 Glucose transporter 87.00% 98.75%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 86.78% 96.90%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.21% 95.89%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.75% 90.71%
CHEMBL2179 P04062 Beta-glucocerebrosidase 82.58% 85.31%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.47% 91.71%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.41% 89.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 17748712
LOTUS LTS0062570
wikiData Q27259473