[(E,6R)-6-hydroxy-6-[(8S,9R,10R,13R,14S,16R,17R)-16-hydroxy-2-[(2S,3R,4S,5S)-4-hydroxy-5-[(2S,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxolan-2-yl]oxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-4,4,9,13,14-pentamethyl-3,11-dioxo-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthren-17-yl]-2-methyl-5-oxohept-3-en-2-yl] acetate

Details

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Internal ID c46044fe-3fed-415f-85d8-757e30f74cb8
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(E,6R)-6-hydroxy-6-[(8S,9R,10R,13R,14S,16R,17R)-16-hydroxy-2-[(2S,3R,4S,5S)-4-hydroxy-5-[(2S,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxolan-2-yl]oxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-4,4,9,13,14-pentamethyl-3,11-dioxo-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthren-17-yl]-2-methyl-5-oxohept-3-en-2-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C54H80O24/c1-21-33(60)37(64)39(66)45(71-21)76-41-36(63)29(75-48-42(35(62)28(19-55)74-48)77-46-40(67)38(65)34(61)22(2)72-46)20-70-47(41)73-27-16-25-24(50(6,7)44(27)68)12-13-30-51(8)17-26(57)43(52(51,9)18-32(59)53(25,30)10)54(11,69)31(58)14-15-49(4,5)78-23(3)56/h12,14-16,21-22,25-26,28-30,33-43,45-48,55,57,60-67,69H,13,17-20H2,1-11H3/b15-14+/t21-,22-,25-,26-,28+,29+,30+,33-,34-,35+,36+,37+,38+,39-,40-,41-,42-,43+,45+,46+,47+,48+,51+,52-,53+,54+/m1/s1
InChI Key GEYQRPFTIAUWJM-IZDSGHFGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C54H80O24
Molecular Weight 1113.20 g/mol
Exact Mass 1112.50395341 g/mol
Topological Polar Surface Area (TPSA) 374.00 Ų
XlogP -1.70
Atomic LogP (AlogP) -1.75
H-Bond Acceptor 24
H-Bond Donor 11
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(E,6R)-6-hydroxy-6-[(8S,9R,10R,13R,14S,16R,17R)-16-hydroxy-2-[(2S,3R,4S,5S)-4-hydroxy-5-[(2S,3R,4S,5S)-4-hydroxy-5-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxolan-2-yl]oxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-4,4,9,13,14-pentamethyl-3,11-dioxo-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthren-17-yl]-2-methyl-5-oxohept-3-en-2-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8573 85.73%
Caco-2 - 0.8637 86.37%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.8327 83.27%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8172 81.72%
OATP1B3 inhibitior + 0.8860 88.60%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9570 95.70%
P-glycoprotein inhibitior + 0.7453 74.53%
P-glycoprotein substrate + 0.7060 70.60%
CYP3A4 substrate + 0.7463 74.63%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8976 89.76%
CYP3A4 inhibition - 0.8194 81.94%
CYP2C9 inhibition - 0.8721 87.21%
CYP2C19 inhibition - 0.9202 92.02%
CYP2D6 inhibition - 0.9427 94.27%
CYP1A2 inhibition - 0.9179 91.79%
CYP2C8 inhibition + 0.7751 77.51%
CYP inhibitory promiscuity - 0.9347 93.47%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5107 51.07%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.8988 89.88%
Skin irritation - 0.5786 57.86%
Skin corrosion - 0.9405 94.05%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7365 73.65%
Micronuclear - 0.7400 74.00%
Hepatotoxicity - 0.6177 61.77%
skin sensitisation - 0.8849 88.49%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.7776 77.76%
Acute Oral Toxicity (c) III 0.5237 52.37%
Estrogen receptor binding + 0.7398 73.98%
Androgen receptor binding + 0.7537 75.37%
Thyroid receptor binding + 0.6761 67.61%
Glucocorticoid receptor binding + 0.8168 81.68%
Aromatase binding + 0.6067 60.67%
PPAR gamma + 0.8110 81.10%
Honey bee toxicity - 0.5731 57.31%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9785 97.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.68% 91.11%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 98.26% 87.67%
CHEMBL2581 P07339 Cathepsin D 97.66% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 95.91% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.23% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.41% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.13% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.35% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.59% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.41% 97.09%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 89.41% 91.07%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.27% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.62% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 85.95% 94.73%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.57% 96.61%
CHEMBL1902 P62942 FK506-binding protein 1A 84.58% 97.05%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.59% 95.89%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 82.95% 89.34%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 82.34% 82.38%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.19% 91.24%
CHEMBL340 P08684 Cytochrome P450 3A4 81.91% 91.19%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.57% 97.36%
CHEMBL4208 P20618 Proteasome component C5 81.04% 90.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.80% 100.00%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 80.75% 94.01%
CHEMBL4829 O00763 Acetyl-CoA carboxylase 2 80.69% 98.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.46% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.18% 99.23%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.12% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bacopa monnieri

Cross-Links

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PubChem 162916186
LOTUS LTS0008100
wikiData Q105007415