3-[(2S,5R,6R)-6-[(E,4R,6S)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-5-(4-hydroxyphenyl)-1H-pyridin-2-one

Details

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Internal ID 13b6457b-bcc8-4d79-9798-b0bb57b9dce7
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name 3-[(2S,5R,6R)-6-[(E,4R,6S)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-5-(4-hydroxyphenyl)-1H-pyridin-2-one
SMILES (Canonical) CCC(C)CC(C)C=C(C)C1C(CCC(O1)C2=C(C(=CNC2=O)C3=CC=C(C=C3)O)O)C
SMILES (Isomeric) CC[C@H](C)C[C@@H](C)/C=C(\C)/[C@H]1[C@@H](CC[C@H](O1)C2=C(C(=CNC2=O)C3=CC=C(C=C3)O)O)C
InChI InChI=1S/C27H37NO4/c1-6-16(2)13-17(3)14-19(5)26-18(4)7-12-23(32-26)24-25(30)22(15-28-27(24)31)20-8-10-21(29)11-9-20/h8-11,14-18,23,26,29H,6-7,12-13H2,1-5H3,(H2,28,30,31)/b19-14+/t16-,17+,18+,23-,26+/m0/s1
InChI Key YDGOHTBOOYAVOP-JYCRKZTRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H37NO4
Molecular Weight 439.60 g/mol
Exact Mass 439.27225866 g/mol
Topological Polar Surface Area (TPSA) 78.80 Ų
XlogP 5.50
Atomic LogP (AlogP) 6.33
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 7

Synonyms

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3-[(2S,5R,6R)-6-[(E,4R,6S)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-5-(4-hydroxyphenyl)-1H-pyridin-2-one
3-((2S,5R,6R)-6-((E,4R,6S)-4,6-dimethyloct-2-en-2-yl)-5-methyloxan-2-yl)-4-hydroxy-5-(4-hydroxyphenyl)-1H-pyridin-2-one
RefChem:163218
InChI=1/C27H37NO4/c1-6-16(2)13-17(3)14-19(5)26-18(4)7-12-23(32-26)24-25(30)22(15-28-27(24)31)20-8-10-21(29)11-9-20/h8-11,14-18,23,26,29H,6-7,12-13H2,1-5H3,(H2,28,30,31)/b19-14
CHEMBL5556883
CHEBI:199701

2D Structure

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2D Structure of 3-[(2S,5R,6R)-6-[(E,4R,6S)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-5-(4-hydroxyphenyl)-1H-pyridin-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9485 94.85%
Caco-2 + 0.5118 51.18%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5723 57.23%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7674 76.74%
OATP1B3 inhibitior + 0.9276 92.76%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.8822 88.22%
BSEP inhibitior + 0.9690 96.90%
P-glycoprotein inhibitior + 0.8255 82.55%
P-glycoprotein substrate + 0.5798 57.98%
CYP3A4 substrate + 0.6464 64.64%
CYP2C9 substrate + 0.7908 79.08%
CYP2D6 substrate - 0.8770 87.70%
CYP3A4 inhibition + 0.6567 65.67%
CYP2C9 inhibition - 0.5795 57.95%
CYP2C19 inhibition + 0.5592 55.92%
CYP2D6 inhibition - 0.9024 90.24%
CYP1A2 inhibition + 0.6029 60.29%
CYP2C8 inhibition + 0.5550 55.50%
CYP inhibitory promiscuity + 0.7655 76.55%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5970 59.70%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9355 93.55%
Skin irritation - 0.7970 79.70%
Skin corrosion - 0.9323 93.23%
Ames mutagenesis + 0.5063 50.63%
Human Ether-a-go-go-Related Gene inhibition + 0.7788 77.88%
Micronuclear + 0.5600 56.00%
Hepatotoxicity + 0.6326 63.26%
skin sensitisation - 0.8170 81.70%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity - 0.9204 92.04%
Acute Oral Toxicity (c) III 0.4883 48.83%
Estrogen receptor binding + 0.7779 77.79%
Androgen receptor binding + 0.8117 81.17%
Thyroid receptor binding + 0.6969 69.69%
Glucocorticoid receptor binding + 0.6585 65.85%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7646 76.46%
Honey bee toxicity - 0.8666 86.66%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.9045 90.45%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.27% 98.95%
CHEMBL4040 P28482 MAP kinase ERK2 98.01% 83.82%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 96.31% 83.10%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.77% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.25% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.67% 89.00%
CHEMBL255 P29275 Adenosine A2b receptor 91.22% 98.59%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.45% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.08% 97.09%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 89.81% 91.71%
CHEMBL226 P30542 Adenosine A1 receptor 89.78% 95.93%
CHEMBL242 Q92731 Estrogen receptor beta 88.98% 98.35%
CHEMBL1951 P21397 Monoamine oxidase A 87.15% 91.49%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 86.63% 95.64%
CHEMBL1937 Q92769 Histone deacetylase 2 85.90% 94.75%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.47% 93.56%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 84.96% 85.11%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.74% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.47% 86.33%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.28% 90.71%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 84.09% 93.10%
CHEMBL206 P03372 Estrogen receptor alpha 84.00% 97.64%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.09% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.71% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.30% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.52% 94.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.47% 90.08%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.21% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 81.15% 94.73%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.00% 97.28%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 80.49% 92.88%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 139583791
LOTUS LTS0214013
wikiData Q75067514