(2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-[(1R,4R)-4-hydroxy-1-methylcyclopent-2-en-1-yl]oxyoxane-3,4,5-triol

Details

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Internal ID 99a63597-5878-4b26-9227-cad9b8b2124d
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-[(1R,4R)-4-hydroxy-1-methylcyclopent-2-en-1-yl]oxyoxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C12H20O7/c1-12(3-2-6(14)4-12)19-11-10(17)9(16)8(15)7(5-13)18-11/h2-3,6-11,13-17H,4-5H2,1H3/t6-,7+,8-,9-,10+,11-,12-/m0/s1
InChI Key UFZWDZHJFRAKDR-MQOZHFKUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C12H20O7
Molecular Weight 276.28 g/mol
Exact Mass 276.12090297 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -2.12
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-[(1R,4R)-4-hydroxy-1-methylcyclopent-2-en-1-yl]oxyoxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7944 79.44%
Caco-2 - 0.7949 79.49%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.6640 66.40%
OATP2B1 inhibitior - 0.8587 85.87%
OATP1B1 inhibitior + 0.9130 91.30%
OATP1B3 inhibitior + 0.9596 95.96%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.9595 95.95%
P-glycoprotein inhibitior - 0.9137 91.37%
P-glycoprotein substrate - 0.9504 95.04%
CYP3A4 substrate + 0.5181 51.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8327 83.27%
CYP3A4 inhibition - 0.9397 93.97%
CYP2C9 inhibition - 0.9345 93.45%
CYP2C19 inhibition - 0.9056 90.56%
CYP2D6 inhibition - 0.9493 94.93%
CYP1A2 inhibition - 0.9232 92.32%
CYP2C8 inhibition - 0.8997 89.97%
CYP inhibitory promiscuity - 0.9188 91.88%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6503 65.03%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9911 99.11%
Skin irritation - 0.8205 82.05%
Skin corrosion - 0.9461 94.61%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5481 54.81%
Micronuclear - 0.7941 79.41%
Hepatotoxicity - 0.7574 75.74%
skin sensitisation - 0.8729 87.29%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity - 0.7375 73.75%
Nephrotoxicity - 0.7522 75.22%
Acute Oral Toxicity (c) III 0.5330 53.30%
Estrogen receptor binding - 0.7462 74.62%
Androgen receptor binding - 0.5332 53.32%
Thyroid receptor binding + 0.5667 56.67%
Glucocorticoid receptor binding - 0.5056 50.56%
Aromatase binding - 0.5507 55.07%
PPAR gamma - 0.5894 58.94%
Honey bee toxicity - 0.8411 84.11%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity - 0.6995 69.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.37% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.18% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.15% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 90.16% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.31% 97.25%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 86.47% 95.83%
CHEMBL3401 O75469 Pregnane X receptor 83.67% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.14% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.33% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Passiflora foetida

Cross-Links

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PubChem 163106159
LOTUS LTS0185683
wikiData Q105272217