methyl (2S,3S,4S,5R,6R)-3,4-dihydroxy-6-[[(3S,5S,8R,9S,10S,13S,14R)-16-hydroxy-10,13-dimethyl-15-oxo-17-[(Z,2R)-4-oxo-5-propan-2-ylhept-5-en-2-yl]-1,2,3,4,5,6,7,8,9,11,12,14-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate

Details

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Internal ID 4ac7e342-73f0-476e-a4e4-ff13392c7a75
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroid glucuronide conjugates
IUPAC Name methyl (2S,3S,4S,5R,6R)-3,4-dihydroxy-6-[[(3S,5S,8R,9S,10S,13S,14R)-16-hydroxy-10,13-dimethyl-15-oxo-17-[(Z,2R)-4-oxo-5-propan-2-ylhept-5-en-2-yl]-1,2,3,4,5,6,7,8,9,11,12,14-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C42H64O15/c1-8-22(18(2)3)25(44)15-19(4)27-30(46)31(47)28-23-10-9-20-16-21(11-13-41(20,5)24(23)12-14-42(27,28)6)54-40-37(34(50)33(49)36(56-40)38(52)53-7)57-39-35(51)32(48)29(45)26(17-43)55-39/h8,18-21,23-24,26,28-29,32-37,39-40,43,45-46,48-51H,9-17H2,1-7H3/b22-8-/t19-,20+,21+,23-,24+,26-,28+,29-,32+,33+,34+,35-,36+,37-,39+,40-,41+,42-/m1/s1
InChI Key VTSZVHKWOJSFCM-BVMUVLEGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C42H64O15
Molecular Weight 808.90 g/mol
Exact Mass 808.42452133 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 3.30
Atomic LogP (AlogP) 2.02
H-Bond Acceptor 15
H-Bond Donor 7
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,3S,4S,5R,6R)-3,4-dihydroxy-6-[[(3S,5S,8R,9S,10S,13S,14R)-16-hydroxy-10,13-dimethyl-15-oxo-17-[(Z,2R)-4-oxo-5-propan-2-ylhept-5-en-2-yl]-1,2,3,4,5,6,7,8,9,11,12,14-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7675 76.75%
Caco-2 - 0.8755 87.55%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8459 84.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7989 79.89%
OATP1B3 inhibitior + 0.8312 83.12%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.5782 57.82%
BSEP inhibitior + 0.8912 89.12%
P-glycoprotein inhibitior + 0.7445 74.45%
P-glycoprotein substrate + 0.5611 56.11%
CYP3A4 substrate + 0.7509 75.09%
CYP2C9 substrate - 0.7962 79.62%
CYP2D6 substrate - 0.8936 89.36%
CYP3A4 inhibition - 0.8957 89.57%
CYP2C9 inhibition - 0.8153 81.53%
CYP2C19 inhibition - 0.9099 90.99%
CYP2D6 inhibition - 0.9461 94.61%
CYP1A2 inhibition - 0.8805 88.05%
CYP2C8 inhibition + 0.6809 68.09%
CYP inhibitory promiscuity - 0.9230 92.30%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6558 65.58%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9128 91.28%
Skin irritation - 0.5859 58.59%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.7334 73.34%
Human Ether-a-go-go-Related Gene inhibition + 0.7367 73.67%
Micronuclear - 0.7900 79.00%
Hepatotoxicity - 0.6408 64.08%
skin sensitisation - 0.9109 91.09%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.6660 66.60%
Acute Oral Toxicity (c) III 0.4634 46.34%
Estrogen receptor binding + 0.8333 83.33%
Androgen receptor binding + 0.7435 74.35%
Thyroid receptor binding - 0.5548 55.48%
Glucocorticoid receptor binding + 0.7359 73.59%
Aromatase binding + 0.7003 70.03%
PPAR gamma + 0.7669 76.69%
Honey bee toxicity - 0.6166 61.66%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.47% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.53% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.54% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.07% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.01% 97.09%
CHEMBL2581 P07339 Cathepsin D 91.12% 98.95%
CHEMBL1937 Q92769 Histone deacetylase 2 90.86% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.97% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.17% 95.56%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 89.03% 94.33%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.35% 96.47%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 87.11% 98.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.84% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.40% 96.00%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 86.25% 97.47%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 85.87% 97.50%
CHEMBL237 P41145 Kappa opioid receptor 85.58% 98.10%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.56% 96.90%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 85.51% 95.71%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.35% 95.89%
CHEMBL1871 P10275 Androgen Receptor 85.13% 96.43%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 84.85% 91.24%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.81% 95.83%
CHEMBL5255 O00206 Toll-like receptor 4 83.47% 92.50%
CHEMBL340 P08684 Cytochrome P450 3A4 83.41% 91.19%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 83.20% 95.71%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.17% 90.71%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.07% 95.50%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 81.94% 98.46%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 81.81% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.70% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.43% 99.23%
CHEMBL2094135 Q96BI3 Gamma-secretase 80.17% 98.05%
CHEMBL3437 Q16853 Amine oxidase, copper containing 80.04% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162989883
LOTUS LTS0040061
wikiData Q105292992